| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1957 |
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| Symbol | |
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| ID | 8132900 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 2248416 |
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| End bp | 2249669 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644865246 |
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| Product | D-amino acid dehydrogenase small subunit |
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| Protein accession | YP_003017534 |
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| Protein GI | 253688344 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGGTTG TGATTCTGGG AAGTGGCGTA GTTGGCGTGA GTACCGCCTG GTATCTTGCG
CAGGAAGGGC ATGATGTCAC CGTTATCGAT AGACAACCGG AGCCCGCGTT AGAAACCAGC
GCTGGGAATG CCGGGCAGAT TTCTCCCGGC TATGCTGCGC CCTGGGCGGC GCCGGGAATA
CCGCTGAAAG CGATAAAATG GATGTTTCAG CGCCATGCGC CTCTGGCTAT CCGGCCCGAC
TTCACGGCCG CGCAGTTGTG CTGGATGTGG CAAATGTTGC TCAATTGCGA TGCGCGCCAC
TATAAGACCA ATAAAGCGAG GATGGTGCGT CTGGCGGAGT ACAGCCGTGA TTGTTTGCAA
CAGCTGCGGC GAGATACCGG TATTCAGTAC GAAGGTCGGC AGGGCGGAAC GCTGCAACTG
TTCCGTACCG AACAGCAATA TGACAATGCA ACTCGGGATA TCGCCGTGCT GGAAGAGGCT
GGCGTGCCAT ACCAACTGCT GACGCGTCAT GAGCTGGCCT CTGTTGAACC TGCGCTGGCA
AATGTGGCGG AGAAACTGAC CGGCGGGCTG CGCTTACCAC ATGATGAGAC AGGGGACTGT
CAGCTGTTCA CTCGTCAACT AGCGGCGATG GCTGCCGATG CGGGCGTCAC CTTCAAACTG
GGGCGCCACG TTCGTCAGTT ACGGGTGGAA GGCCAAAACG TGACGGGCGT ACAGTGTGAT
GACGAGATGA TCGTGGCGGA CGCCTATGTG ATGGCCTGCG GTTCCTATTC CACGGGGCTA
CTGCGCCAAT GGTTCGATAT TCCGGTTTAT CCGCTGAAAG GCTATTCACT GACGATCCCG
CTGGCGGATG ATGCCTCCGC GCCAGTTTCT ACCGTGCTAG ATGAAACCTA CAAAGTGGCA
ATCACGCGTT TTGATCGTCG CATCCGCGTT GGAGGAATGG CAGAGGTCGT GGGCTTCAAC
ACCGATCTGA ATCCTAAACG ACGTGAAACG CTGGAGATGG TCGTGCGCGA TCTGTATCCC
CATTGCGGCC CGATTGAACA AGCGACATTC TGGACGGGGC TGCGTCCGAT GACGCCAGAC
GGCACGCCGC TGGTGGGGCG TTCTCCGCTG AAAAATCTGT ATCTGAATAC CGGACATGGC
ACGTTAGGCT GGACGATGGC CTGCGGGTCA GGAAAGTTAC TGGCGGATAT TCTGTCGGAC
AAATCACCGG AGATTGAAGC CAATGATTTG TCCGTGGAAA GATACGTTCG TTAG
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| Protein sequence | MRVVILGSGV VGVSTAWYLA QEGHDVTVID RQPEPALETS AGNAGQISPG YAAPWAAPGI
PLKAIKWMFQ RHAPLAIRPD FTAAQLCWMW QMLLNCDARH YKTNKARMVR LAEYSRDCLQ
QLRRDTGIQY EGRQGGTLQL FRTEQQYDNA TRDIAVLEEA GVPYQLLTRH ELASVEPALA
NVAEKLTGGL RLPHDETGDC QLFTRQLAAM AADAGVTFKL GRHVRQLRVE GQNVTGVQCD
DEMIVADAYV MACGSYSTGL LRQWFDIPVY PLKGYSLTIP LADDASAPVS TVLDETYKVA
ITRFDRRIRV GGMAEVVGFN TDLNPKRRET LEMVVRDLYP HCGPIEQATF WTGLRPMTPD
GTPLVGRSPL KNLYLNTGHG TLGWTMACGS GKLLADILSD KSPEIEANDL SVERYVR
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