| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1949 |
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| Symbol | |
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| ID | 8132892 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2241266 |
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| End bp | 2242807 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644865238 |
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| Product | SpoVR family protein |
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| Protein accession | YP_003017526 |
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| Protein GI | 253688336 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2719] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0479181 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTATAT CCACGGATAA TCAGGTAAAA AAAACACTTC GCCTGAGTGA TGGACCGGAC
TGGACGTTTG AGTTATTGCA GGTTTACCTT GATGAAATTG ATCGGGTGGC CAAGTTGTAT
CGTCTGTCGA CCTATCCTCA TCAGATCGAA GTCATCACCT CAGAACAAAT GATGGACGCC
TATTCCAGTA TAGGAATGCC GATCAACTAT GCCCACTGGT CGTTCGGGAA GAAATTTATC
GAAACCGAAC AGCGCTACAA ACACGGGCAG CAGGGGCTGG CGTATGAAAT CGTCATCAAC
TCCGATCCCT GTATCGCGTA TTTGATGGAA GAGAACACAC TGCCGATGCA GGCGCTGGTC
ATGGCGCATG CCTGCTACGG GCACAACTCG TTCTTCAAAG GCAACTACCT GTTCCGCAGT
TGGACCGACG CCAGCTCCAT CGTCGATTAC CTGCTGTTTG CCCGGCAATA TATCGCGCAA
TGCGAAGAGC GTTATGGCGT GGACGAAGTG GAACGCCTGT TAGATTCCTG CCATGCGCTC
ATGAATTACG GAGTTGACCG CTACAAGCGC CCACAAAAAA TTTCGCTTGA AGAGGAAAAG
TCCCGCCAGA AAAGCCGTGA AGCCTACCTG CAAAGCCAGG TTAATGATCT CTGGAAGACA
TTACCACGGC GAGAACAAGG TGCCGCACCG GAGCAGGCGA GACGCTTTCC ACAAGAGCCG
CAGGAAAACC TGCTCTATTT TATGGAGAAG AACGCGCCGC TGCTGGAGCC CTGGCAGCGT
GAGGTTCTGC GTATCGTGCG GAAAGTCAGT CAGTATTTTT ATCCGCAGAA GCAGACGCAG
GTAATGAATG AAGGCTGGGC GACGTTCTGG CACTACACCA TTCTGAACCA TCTCTATGAT
GAAGGCCGGG TCACTGAGCG CTTCATGATG GAATTCCTGC ACAGCCATAC CAACGTGATC
TATCAACCAC CGTATAACAG CCCGTATTAC AGCGGAATCA ACCCCTATGC GCTGGGCTTC
GCGATGTTTC AGGATATCAA GCGCATTTGT CAGTCGCCGA CGGACGAGGA CCGTTACTGG
TTCCCCGATA TTGCCGGTAA AGACTGGCTC GATACGCTGC ATTTTGCGAT GCAGAACTTC
AAGGACGAGA GTTTCATCAG CCAGTTCCTG TCGCCTAAGC TGATGCGTGA TTTCCGGCTA
TTTACGGTGC TGGACGACGA TCGAAACAAC TATCTGGAAA TCGCGGCGAT TCACGACGAA
GAAGGCTACC GCCTGATCCG GCAGGAGCTT TCCGCACAGT ACAACCTGAG CCATCTGGAG
CCGAATATTC AGGTCTGGAA TGTGGATTTG CGCGGTAATC GGGCGCTAAC GCTGCGCTAT
GTTCCGCATA ATCGCGCCCC ACTGGATAAA AGCAGCCAGG AAGTGTTGAA GCACGTCCAT
CGTCTCTGGG GCTTTGACGT CTATCTGGAA CAGGCTAACA CAGATGGCAG CGTTGAGCTG
CTTGAACGCT GCCCGCCGCG TAACGGAACA GCATCCACAT AG
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| Protein sequence | MAISTDNQVK KTLRLSDGPD WTFELLQVYL DEIDRVAKLY RLSTYPHQIE VITSEQMMDA
YSSIGMPINY AHWSFGKKFI ETEQRYKHGQ QGLAYEIVIN SDPCIAYLME ENTLPMQALV
MAHACYGHNS FFKGNYLFRS WTDASSIVDY LLFARQYIAQ CEERYGVDEV ERLLDSCHAL
MNYGVDRYKR PQKISLEEEK SRQKSREAYL QSQVNDLWKT LPRREQGAAP EQARRFPQEP
QENLLYFMEK NAPLLEPWQR EVLRIVRKVS QYFYPQKQTQ VMNEGWATFW HYTILNHLYD
EGRVTERFMM EFLHSHTNVI YQPPYNSPYY SGINPYALGF AMFQDIKRIC QSPTDEDRYW
FPDIAGKDWL DTLHFAMQNF KDESFISQFL SPKLMRDFRL FTVLDDDRNN YLEIAAIHDE
EGYRLIRQEL SAQYNLSHLE PNIQVWNVDL RGNRALTLRY VPHNRAPLDK SSQEVLKHVH
RLWGFDVYLE QANTDGSVEL LERCPPRNGT AST
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