Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1932 |
Symbol | |
ID | 8132875 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 2225435 |
End bp | 2225779 |
Gene Length | 345 bp |
Protein Length | 114 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644865221 |
Product | Endoribonuclease L-PSP |
Protein accession | YP_003017509 |
Protein GI | 253688319 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGATCA CACGTATTAA TCCTGAAGCT CGCTGGTCAG ACGCCGTCAT CCACAACAAC ACGCTGTATT ACACCAGCGT GCCGGAGAAC CTGGATGACG GTGCACAGGC GCAAACGGAG AACGCGCTGG GCGCGCTGGA TGCCATCCTG CAACAGGCGG GAACGGATAA GAGCAAGCTG TTGGACGTGA CGATTTTTCT CGCCGATGCA GATGATTTTG CCGCGATGAA CGCCGCGTGG GATGCCTGGG TCGTGGCTGG CAGCGCGCCC GTACGCTGCA CCGTACAGGC TAAGTTGATG CATCCGAAAT TTAAAGTCGA AATAAAAGCG ATTGCGGCAA TATAA
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Protein sequence | MAITRINPEA RWSDAVIHNN TLYYTSVPEN LDDGAQAQTE NALGALDAIL QQAGTDKSKL LDVTIFLADA DDFAAMNAAW DAWVVAGSAP VRCTVQAKLM HPKFKVEIKA IAAI
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