Gene PC1_1932 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1932 
Symbol 
ID8132875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp2225435 
End bp2225779 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content56% 
IMG OID644865221 
ProductEndoribonuclease L-PSP 
Protein accessionYP_003017509 
Protein GI253688319 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGATCA CACGTATTAA TCCTGAAGCT CGCTGGTCAG ACGCCGTCAT CCACAACAAC 
ACGCTGTATT ACACCAGCGT GCCGGAGAAC CTGGATGACG GTGCACAGGC GCAAACGGAG
AACGCGCTGG GCGCGCTGGA TGCCATCCTG CAACAGGCGG GAACGGATAA GAGCAAGCTG
TTGGACGTGA CGATTTTTCT CGCCGATGCA GATGATTTTG CCGCGATGAA CGCCGCGTGG
GATGCCTGGG TCGTGGCTGG CAGCGCGCCC GTACGCTGCA CCGTACAGGC TAAGTTGATG
CATCCGAAAT TTAAAGTCGA AATAAAAGCG ATTGCGGCAA TATAA
 
Protein sequence
MAITRINPEA RWSDAVIHNN TLYYTSVPEN LDDGAQAQTE NALGALDAIL QQAGTDKSKL 
LDVTIFLADA DDFAAMNAAW DAWVVAGSAP VRCTVQAKLM HPKFKVEIKA IAAI