Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1928 |
Symbol | |
ID | 8132871 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 2221231 |
End bp | 2222595 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644865217 |
Product | L-serine dehydratase 1 |
Protein accession | YP_003017505 |
Protein GI | 253688315 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1760] L-serine deaminase |
TIGRFAM ID | [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.38785 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATAAGCG TTTTCGACAT GTTTAAGATC GGTATTGGCC CCTCTAGCTC TCATACGGTT GGACCGATGA AAGCCGGTAA GCAATTTGTC GATGAATTGA TCAACCAGAA TTTACTGACC GCGACGACGC GTATTGCCGT CGATGTGTAT GGCTCGCTGT CGCTAACGGG TAAAGGTCAC CACACAGATA TCGCCATCAT CATGGGTCTG GCGGGCAACA TGCCGGATAC GGTTGATATT GACGCCATCC CCGGCTTTAT CCGCGATGTT GAGCAACGCG AACGCCTGCT GCTGGCTAAT GGGCAGCATG AAGTCGATTT CCCACGCGAA GGCGGCATGG TTTTCCGCAG TGAAAATCTG CCATTGCACG AAAACGGCAT GACCATCACT GCCTTTGCCA GCAATAAAGA AGTTTATAGC AAAACCTATT ACTCCATCGG CGGTGGTTTT ATCGTCGATG AAGAGCATTT TGGCAAAGAC ACCGCCACTG ACGTCTCCGT TCCTTATACA TTCCATTCCG CCAAAGAGAT GCTGGAGCAC TGTAAACAGA GCGGTCTTTC GCTTTCTGGA ATGGTGATGC GTAACGAACT GGCGCTACAT AGCCGTCAGG AGATTGACGC GTACTTTGCC GATATCTGGC AGACGATGCG TGCTTGTATC GATCGCGGCA TGAACACCGA AGGCGTGCTG CCGGGCCCGC TGCGCGTACC GCGTCGTGCC TCTGCACTGC GTCGTATGCT GGTTTCTTCC GACAAGTTGT CTAACGACCC AATGAACGTG GTGGACTGGG TTAATATGTT CGCACTCGCG GTGAATGAAG AAAACGCCGC AGGCGGCCGC GTGGTTACCG CGCCAACAAA CGGCGCATGC GGCATCGTCC CCGCCGTTCT TGCCTATTAC GACCACTTTA TCGAACCGGT TAGCCCGACC ATTTATATCC GCTATTTCCT CGCGGCAGGC GCGGTCGGCA TTCTGTATAA AATGAACGCC TCCATCTCCG GTGCCGAAGT GGGCTGTCAG GGTGAAGTCG GCGTGGCCTG CTCGATGGCC GCCGCCGGGC TGGCAGAACT GATGGGCGCC AGCCCGGAAC AAGTTTGCGT CGCTGCCGAG ATCGGTATGG AACACAACCT GGGCTTAACC TGCGATCCGG TTGCTGGTCA GGTACAGGTT CCGTGCATCG AACGTAACGC GATTGCTTCC GTTAAGGCGA TTAACGCCGC TCGCATGGCA ACCCGCCGCA CCAGCGAACC CCGCGTCTCG CTGGATAAGG TTATTGAAAC CATGTACGAA ACGGGTAAAG ACATGAACGC CAAATACCGC GAAACCTCAC GAGGCGGGCT GGCGATCAAA GTACAGTGTG ATTAA
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Protein sequence | MISVFDMFKI GIGPSSSHTV GPMKAGKQFV DELINQNLLT ATTRIAVDVY GSLSLTGKGH HTDIAIIMGL AGNMPDTVDI DAIPGFIRDV EQRERLLLAN GQHEVDFPRE GGMVFRSENL PLHENGMTIT AFASNKEVYS KTYYSIGGGF IVDEEHFGKD TATDVSVPYT FHSAKEMLEH CKQSGLSLSG MVMRNELALH SRQEIDAYFA DIWQTMRACI DRGMNTEGVL PGPLRVPRRA SALRRMLVSS DKLSNDPMNV VDWVNMFALA VNEENAAGGR VVTAPTNGAC GIVPAVLAYY DHFIEPVSPT IYIRYFLAAG AVGILYKMNA SISGAEVGCQ GEVGVACSMA AAGLAELMGA SPEQVCVAAE IGMEHNLGLT CDPVAGQVQV PCIERNAIAS VKAINAARMA TRRTSEPRVS LDKVIETMYE TGKDMNAKYR ETSRGGLAIK VQCD
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