Gene PC1_1926 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1926 
Symbol 
ID8132869 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp2218047 
End bp2219015 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content50% 
IMG OID644865215 
ProductPTS system, mannose/fructose/sorbose family, IIB subunit 
Protein accessionYP_003017503 
Protein GI253688313 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3444] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB 
TIGRFAM ID[TIGR00824] PTS system, mannose/fructose/sorbose family, IIA component
[TIGR00854] PTS system, mannose/fructose/sorbose family, IIB component 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.684419 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTATTG CCATAATGTT ATGCACTCAC GGCGCCACTG CGGGACCGCT GTTAAAGACA 
GCAGAAATGA TCCTTGGCGA GCAAAGTAAC GTCGCCTGGA TCGATTTCGT TCCTGGAGAA 
AACGCCGAAA CCTTGATAGA AAAATATCAG GAAAAACTCA CGCAGTTGGA CACATCGCAA 
GGCGTGCTGT TTCTCGTTGA TACCTGGGGC GGCAGCCCGT TTAACGCCGC CAGTCGCCTC 
GTCACCGACA AAGAAAACCA TGATGTTATC GCTGGCGTGA ATATCCCCAT GTTGGCAGAA 
ACCTTTATGG CTCGGGATGA TGATCCTTCC TTTTCCGCTC TGGTTTCTAT CGCTCTTGAA 
GCTGGTAGAG ATGGCGTAAA AGCGCTGAAG CATCAGGAAA AACCCAAGGC AACGCCCCCT 
TCCCCTCCAC CACCTCCAAA AGCCAACGCC GTTCCCACAC CAGCAGGATC CGGTGAACAC 
ATGAAGATAG GACTGGCGCG TATCGATGAC CGTCTGATTC ATGGTCAGGT CGCCACCCGA 
TGGACGAAAG AAACCAATGT TTCGCGCATT ATTGTCGTCA GCGATGAAGT CGCCGCCGAT 
CACGTGCGTA AAACGTTGTT GACTCAGGTT GCGCCACCGG GCGTTACCGC TCACGTGGTG 
GATGTGGCAA AAGCCGTTCG TGTTTATGAC AACCCCAAAT ATGCCGCCGA TCGCGTGATG 
TTACTGTTCA CCAATCCGAC GGATGTATTA ACGCTGATCG AAAATGGCGT AAAAATCACT 
TCGGTCAATA TTGGCGGAAT GGCATTCAAA CAGGGAAAAA CGCAGGTCAA TAACGCTGTT 
TCTATCGATG AGAAGGATAT CGCTGCATTC CGAGAATTAG ATAAACGCGG AATTGAATTG 
GAGGTTCGAA AAGTCTCAAC CGATACCCGG CTTAAAATGA TGGATTTAAT TAACAAAATG 
CCGCGCTGA
 
Protein sequence
MSIAIMLCTH GATAGPLLKT AEMILGEQSN VAWIDFVPGE NAETLIEKYQ EKLTQLDTSQ 
GVLFLVDTWG GSPFNAASRL VTDKENHDVI AGVNIPMLAE TFMARDDDPS FSALVSIALE 
AGRDGVKALK HQEKPKATPP SPPPPPKANA VPTPAGSGEH MKIGLARIDD RLIHGQVATR 
WTKETNVSRI IVVSDEVAAD HVRKTLLTQV APPGVTAHVV DVAKAVRVYD NPKYAADRVM 
LLFTNPTDVL TLIENGVKIT SVNIGGMAFK QGKTQVNNAV SIDEKDIAAF RELDKRGIEL 
EVRKVSTDTR LKMMDLINKM PR