| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1925 |
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| Symbol | |
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| ID | 8132868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2217072 |
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| End bp | 2217869 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644865214 |
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| Product | PTS system, mannose/fructose/sorbose family, IIC subunit |
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| Protein accession | YP_003017502 |
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| Protein GI | 253688312 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3715] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC |
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| TIGRFAM ID | [TIGR00822] PTS system, mannose/fructose/sorbose family, IIC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.203472 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAGATTA CCACACTTCA AATTGTGCTG ATATTTCTCG TCGCGTGTGT TTCGGGGATG
GGTTCAATTC TTGATGAATT CCAGTTCCAC CGTCCACTCG TCGCCTGTAC GCTGATTGGC
GCAGTATTAG GTGATTTAAA AACCGGGATC ATTATTGGCG GTACGCTGGA AATGATCGCA
TTAGGCTGGA TGAACATCGG TGCGGCCGTC GCACCGGATG CGGCCCTGGC CTCGATTATT
TCAACCATTC TGGTGATTGC CGGCGGTCAG GGGATCGGCG CCGGGATTGC GCTAGCGATT
CCGCTCGCCG CAGCCGGACA AGTATTAACC ATCATTGTTC GTACCATCAC AGTCGCATTC
CAACATGCGG CGGATAGCGC GGCAGAGCGA GGTAATCTGA CAGCCATCAG TTGGATTCAT
GTCTCCGCAC TGCTGCTACA AGCGATGCGC ATCGCGATCC CTGCGGTCAT TGTCGCGGTT
TCCGTCGGCA CCGATGCCGT CCACGCCATG CTGAATTCCA TCCCGGAAGT GGTTACCAAC
GGTCTGAATA TCGCCGGTGG CATGATTGTC GTCGTCGGTT ACGCGATGGT CATCAACATG
ATGCGTGCAG GCTACCTGAT GCCGTTCTTC TATCTTGGCT TCGTTACCGC TGCGTTCACC
GAGTTCAATC TGGTGGCGCT GGGCGTAATC GGTATTGTGA TGGCGGTGCT GTATATCCAG
CTCAGCCCGA AATATAACAA GGTTCAAGGC CAGCCGGTTT CATCAGGCAA TAACGACCTT
GATAACGAAC TGGATTAA
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| Protein sequence | MEITTLQIVL IFLVACVSGM GSILDEFQFH RPLVACTLIG AVLGDLKTGI IIGGTLEMIA
LGWMNIGAAV APDAALASII STILVIAGGQ GIGAGIALAI PLAAAGQVLT IIVRTITVAF
QHAADSAAER GNLTAISWIH VSALLLQAMR IAIPAVIVAV SVGTDAVHAM LNSIPEVVTN
GLNIAGGMIV VVGYAMVINM MRAGYLMPFF YLGFVTAAFT EFNLVALGVI GIVMAVLYIQ
LSPKYNKVQG QPVSSGNNDL DNELD
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