| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1924 |
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| Symbol | |
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| ID | 8132867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2216215 |
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| End bp | 2217057 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644865213 |
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| Product | PTS system mannose-specific transporter subunit IID |
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| Protein accession | YP_003017501 |
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| Protein GI | 253688311 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3716] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID |
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| TIGRFAM ID | [TIGR00828] PTS system, mannose/fructose/sorbose family, IID component |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.116056 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGTCGAAA ACACGAATGT CAAAAAACTC ACTGACAGCG ACATCCGCGC GGTGTTTATT
CGTTCCAACC TGTTTCAAGG CTCCTGGAAC TTTGAACGTA TGCAGGCACT CGGCTTCTGT
TTTTCCATGG TGCCGGTAAT TCGCCGTCTT TATCCTGAAA ACTCGGAAGA GCGTAAACAG
GCGATCAAGC GCCATCTGGA GTTCTTCAAT ACACAGCCCT TTGTTGCGGC TCCGGTACTC
GGCGTAACGA TGGCGATGGA AGAGCAACGC GCGAATGGCG CTCCCATTGA TGACGCGGCA
ATAAACGGCC TGAAAGTCGG GCTGATGGGG CCACTGGCTG GCGTCGGCGA CCCGATATTC
TGGGGCACCG CCCGTCCGGT ATTCGCTGCA CTGGGTGCAG GGATTGCCAT GAGCGGCAGC
CTGTTAGGGC CTGTCCTCTT CTTCGTCCTG TTCAATTTGG TTCGCCTGCT GGTGCGCTAC
TATGGCGTCG CTTACGGCTA CCGTAAAGGA ATTGATATCG TTAGCGATAT GGGCGGCGGC
TTCCTGCAAA AAATGACCGA GGCGGCCTCT ATTCTCGGTC TATTCGTCAT GGGGGCGTTG
GTCAATAAAT GGACCCACGT CAACATTCCG ATGGTGGTGT CGACGGTGAC GAACCAGAAC
GGTGAAACCA CGGTGACAAC CGTTCAATCC ATCCTTGATC AGCTTATGCC TGGGCTCGTT
CCCCTATTGC TGACGTTCGG CTGTATGTGG CTGTTACGGC GCAAAGTGAA CGCACTGTGG
CTGATTATGG GCTTCTTCGC CATTGGTATC TTCGGATACT GGATCGGTCT GCTCGGCGTG
TAA
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| Protein sequence | MVENTNVKKL TDSDIRAVFI RSNLFQGSWN FERMQALGFC FSMVPVIRRL YPENSEERKQ
AIKRHLEFFN TQPFVAAPVL GVTMAMEEQR ANGAPIDDAA INGLKVGLMG PLAGVGDPIF
WGTARPVFAA LGAGIAMSGS LLGPVLFFVL FNLVRLLVRY YGVAYGYRKG IDIVSDMGGG
FLQKMTEAAS ILGLFVMGAL VNKWTHVNIP MVVSTVTNQN GETTVTTVQS ILDQLMPGLV
PLLLTFGCMW LLRRKVNALW LIMGFFAIGI FGYWIGLLGV
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