Gene PC1_1922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1922 
Symbol 
ID8132865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp2214561 
End bp2215133 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content49% 
IMG OID644865211 
Producthypothetical protein 
Protein accessionYP_003017499 
Protein GI253688309 
COG category[S] Function unknown 
COG ID[COG1971] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.0107711 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATGT CAGCAACACT TATCCTAGCA TTTGGTATGT CAATGGATGC CTTCGCCGCG 
TCAATCGGTA AAGGTGCCGT CCTGCATAAT CCTCGTTTCC GTGATGCCAT CCGTACTGGT 
CTCATTTTCG GCGTTATTGA AGCTATCACC CCGCTCATCG GTTGGGCACT TGGTTTCTTT 
GCCAGTCAAT ATATTCTCGA GTGGGATCAC TGGGTTGCCT TTACGCTCTT ACTGATCTTA 
GGCGGACGTA TGGTTGTTGA AGGATTCAAA GGTTCTTCAG ACTGTCGTTG TGAAAAAGTC 
AAAAATCATA GCCTGGCGCT GCTGGTCTGC ACGGCAATTG CCACCAGCCT GGATGCCATG 
GCCATCGGCG TCGGTCTGGC TTTCCTTCAG GTCAATATTC TCCATACTGC GATGGTGATT 
GGTTGCGCCA CTATGATCAT GGTTACGCTT GGAATGATGA TTGGCCGCTA TATTGGCCCA 
ATTCTTGGTA AAAAAGCAGA AGTGATGGGT GGGCTGGTTC TGATTGGTAT CGGCTGTAAT 
ATCCTGTATG AGCATCTCGG CTACGCCGCC TGA
 
Protein sequence
MNMSATLILA FGMSMDAFAA SIGKGAVLHN PRFRDAIRTG LIFGVIEAIT PLIGWALGFF 
ASQYILEWDH WVAFTLLLIL GGRMVVEGFK GSSDCRCEKV KNHSLALLVC TAIATSLDAM 
AIGVGLAFLQ VNILHTAMVI GCATMIMVTL GMMIGRYIGP ILGKKAEVMG GLVLIGIGCN 
ILYEHLGYAA