Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1900 |
Symbol | |
ID | 8132843 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 2192797 |
End bp | 2194191 |
Gene Length | 1395 bp |
Protein Length | 464 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644865189 |
Product | sodium:dicarboxylate symporter |
Protein accession | YP_003017477 |
Protein GI | 253688287 |
COG category | [R] General function prediction only |
COG ID | [COG1823] Predicted Na+/dicarboxylate symporter |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTTTC CGCTACTCAT AAATATTCTG CTATTTGTCG TATTACTACT CGGACTCGGT TACGCCAGCC GTAACCCCTC CTGGAGTCTG GCAAAGAAAG TGTTGCTGGG TTTGGTTGTC GGGGTATTAT TTGGCCTGGC GCTGCATCTG ATTTATGGCG GCGACAACCC GGTCATTAAA CAGTCCATCT CATGGTTTAA CATCGTCGGT AATGGCTATG TGCAGCTGTT ACAGATGATC GTCATGCCGC TGGTATTTAT CTCCATCCTG AATTCTGTTG CCAAGCTGCA TAATGCGTCG TCATTAGGGA AAATCAGCCT ATTAACGCTT TCCACCCTGT TGATCACCAC GCTGATTTCT GCGTTGGTCG GCGTCTTTGT GACTAACTTG TTTGGCCTGA CGGCTACCGG GTTAGTGCAA GGCGCACAAG AAACCGCGCG ATTAACGGCG ATTGAAAACA ACTATGCCGG TAAAGTTGCT GACCTTAACG TTCCTCAGCT TATCCTGTCA TTCATTCCTA AAAACCCGTT TGCTGAGCTG ACCGGCGCTA ACCCGACGTC CATCATCAGT ATCGTCGTCT TCGCGGCGTT CCTTGGCGTG GCCGCCCTGC AACTACTGAA AGATGACGCG GTGAAAGGCG AACGTGTGTT AACTGCCATT GATACGCTGC AATCCTGGGT GATGAAGCTC GTTCGTCTGG TGATGAAATT GACCCCATAC GGCGTCATGG CGTTAATGAC CAAAATGGTC GCCAGTTCTA ACCTTCAAGA CATCCTCAAG TTGGGCAGTT TCGTTGTCGC GTCCTATCTG GGGCTGGCGA TTATGTTCGG CGTCCATGCG CTGATTCTGT CTTTTACGGG CATCAATCCG GCGCGTTTTT ATCGTAAAGT CTGGCCAGTG CTGACGTTCG CATTTACCAG CCGCTCCAGT GCAGCGACGA TCCCACTCAG CATTGAGGCG CAAACGCGCC GTATTGGCGT ACCGCAATCT ATCGCCAGCT TCGCAGCCTC TTTCGGTACG ACCATCGGTC AGAATGGTTG TGCAGGGCTT TATCCGGCAA TGCTGGCCGT CATGGTCGCC CCAACGGTCG GCATTAACCC GCTGGATCCT GTCTGGATCG CGACGCTGGT CGGTATCGTC ACAATCAGTT CTGCCGGCGT AGCCGGTGTC GGTGGCGGCG CAACCTTTGC CGCACTCATC GTCCTGCCTG CTATGGGGCT GCCAGTGACC CTCGTTGCGC TGCTGATCTC CATTGAGCCA CTTATCGATA TGGGCCGTAC TGCGCTTAAC GTCAGCGGTT CGATGACGGC CGGTACCGTC ACCAGCCAAC TGATGAAACA AACAGATAAA ACGGTTTTCA ACGCGCAGGA TGACGCGGAA CTGACACACC GTTAA
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Protein sequence | MNFPLLINIL LFVVLLLGLG YASRNPSWSL AKKVLLGLVV GVLFGLALHL IYGGDNPVIK QSISWFNIVG NGYVQLLQMI VMPLVFISIL NSVAKLHNAS SLGKISLLTL STLLITTLIS ALVGVFVTNL FGLTATGLVQ GAQETARLTA IENNYAGKVA DLNVPQLILS FIPKNPFAEL TGANPTSIIS IVVFAAFLGV AALQLLKDDA VKGERVLTAI DTLQSWVMKL VRLVMKLTPY GVMALMTKMV ASSNLQDILK LGSFVVASYL GLAIMFGVHA LILSFTGINP ARFYRKVWPV LTFAFTSRSS AATIPLSIEA QTRRIGVPQS IASFAASFGT TIGQNGCAGL YPAMLAVMVA PTVGINPLDP VWIATLVGIV TISSAGVAGV GGGATFAALI VLPAMGLPVT LVALLISIEP LIDMGRTALN VSGSMTAGTV TSQLMKQTDK TVFNAQDDAE LTHR
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