| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1896 |
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| Symbol | |
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| ID | 8132839 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2188293 |
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| End bp | 2190011 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644865185 |
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| Product | ABC transporter related |
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| Protein accession | YP_003017473 |
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| Protein GI | 253688283 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.332587 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAAGAC GCTTCTTCTC TTACTATTCC CCTTACAAAG GGTTATTCGT TCTCGATTTC
GGCTGCGCCA TCATCGCTGG CCTGCTTGAA TTAGGGTTTC CGATGGCGAT TAAAGCGTTC
ATCGACAAAC TGTTACCGGC TCAGGACTGG TCGCTAATTT TGCTAGCGTC GGTGGCACTA
TTGGCGATCT ATCTGCTGAA TACCGCGCTG ATGGCCATCG TCAACTATTG GGGACACGCA
CTGGGCGTAG GCATTGAAAC CGATATGCGG CGACAGGCCT TTGAGCACCT GCAAAATTTG
CCGTTCCGCT ACTACGACAA TATGAAGACC GGGCATATCA TCACCCACGT CACCAAAGAT
CTGGAAGAGG TCGGGGAAAT CGCCCACCAC GGCCCGGAAG ACCTCTTCCT CGCGATCATG
ACCTTCATCG GTGCGTTCAT ACTGATGGCG ATCGTTCACC TGAACCTGGC GCTGCTGACG
ATTATTATCG TGCCTTTCAT GACGTATCTC GTCAGCCGCT ATGGCGCCCG CATGACGGAA
ACCTGGCGTC AACTCTTCGG TCAGGTTGGC AATTTCAACG CCCGGATTGA AGAGAGCGTA
GGCGGTATCC GCGTCGTTAA AGCGTTTGCT AATGAAGCAC ATGAGAAAAA ACTGTTCTCT
AACGATAACG AAAACTACCG CCGCACCAAA TTGCAGGCCT ATCGCATCAT GACCGCCAGT
CTAACGCTCA GCTACCTCAG CACGCGTCTG ATACAGCTTA TCGTCATGCT GGCAGGTATT
TGGTATGTCA TTCAGGGTGA ACTCAGCTAC GGCGGTTTTA TCGGCTTCCT GCTGCTGATT
GAAGTTTTCT TCCGCCCTGT GGCAAAAATT ACCTCGGTGT TGGAGAGCTA TCCTAAAGGC
ATTGCGGGCT TCAAACGCTT TACCCAGCTG ATCGATACCG TTCCCGAGAT TGCCGATGCC
CCCGACGCAC GTGATGCCGG GCAGTTGAAA GGCGATATCC GGTTTAATCA GGTGAGCTTT
GGCTATTCCG CCGATCGCCC GATTCTCAGT AATATCGACC TGTCGATTCG TGCCGGGGAA
ACCGTAGCCT TTGTCGGCCC ATCCGGCGCG GGTAAAACGA CGCTTTGTTC TCTGCTTCCC
CGCTTCTACG ATTTAACCAG CGGAGCCATC ACTATTGACG GTATGGATAT CCGTCAGATG
ACACAGGCGT CGCTACGCAG CCAAATCGGC ATCGTACAGC AGGATGTATT CCTGTTCGGC
GGCACCATTC GGGAAAATAT CGCCTACGGC AAACTTGATG CCAGCGATGA CGAAATCATG
GAAGCCGCAC GGCGTGCACG GTTAGATGAA CTGATCGAGA ATCTGCCCGA TGGACTGGAT
ACCGTGGTCG GTGAGCGCGG CGTTAAGTTG TCAGGCGGGC AGAAACAACG TCTATCGATC
GCACGCATCT TCCTGAAAAA CCCACCGATT CTGATTCTTG ACGAAGCAAC ATCCGCGCTG
GATACGGCAA CGGAACAGGC AATACAGCAG TCTCTCAGCG AACTTTCGGC AGGGCGTACC
ACGTTGGTCA TCGCTCACAG GCTGGCAACC ATACAGAATG CCGGACGTAT TGTGGTGGTG
GATAACGGCA GCATCATTGA ACAAGGTAGC CATCAGGGGC TGCTGGAACA AAGCGGTATT
TATGCCAGAT TACATCAGGC ACAGTTCGGC CTGGCCTGA
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| Protein sequence | MLRRFFSYYS PYKGLFVLDF GCAIIAGLLE LGFPMAIKAF IDKLLPAQDW SLILLASVAL
LAIYLLNTAL MAIVNYWGHA LGVGIETDMR RQAFEHLQNL PFRYYDNMKT GHIITHVTKD
LEEVGEIAHH GPEDLFLAIM TFIGAFILMA IVHLNLALLT IIIVPFMTYL VSRYGARMTE
TWRQLFGQVG NFNARIEESV GGIRVVKAFA NEAHEKKLFS NDNENYRRTK LQAYRIMTAS
LTLSYLSTRL IQLIVMLAGI WYVIQGELSY GGFIGFLLLI EVFFRPVAKI TSVLESYPKG
IAGFKRFTQL IDTVPEIADA PDARDAGQLK GDIRFNQVSF GYSADRPILS NIDLSIRAGE
TVAFVGPSGA GKTTLCSLLP RFYDLTSGAI TIDGMDIRQM TQASLRSQIG IVQQDVFLFG
GTIRENIAYG KLDASDDEIM EAARRARLDE LIENLPDGLD TVVGERGVKL SGGQKQRLSI
ARIFLKNPPI LILDEATSAL DTATEQAIQQ SLSELSAGRT TLVIAHRLAT IQNAGRIVVV
DNGSIIEQGS HQGLLEQSGI YARLHQAQFG LA
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