Gene PC1_1889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1889 
SymbolinfC 
ID8132832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp2182391 
End bp2182933 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content49% 
IMG OID644865178 
Producttranslation initiation factor IF-3 
Protein accessionYP_003017466 
Protein GI253688276 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0290] Translation initiation factor 3 (IF-3) 
TIGRFAM ID[TIGR00168] translation initiation factor IF-3 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATTAAAGGCG GAAAACGAGT TCAACCGGCG CGTCCTAATC GCATCAACAG AGAAATTCGC 
GCACATGAGG TACGCCTGAC AGGCGTCGAA GGCGAACAGC TTGGCATTGT CAGTCTGAAT
GAAGCATTAG AAAAAGCCGA GGAAGCAGGT GTTGATTTAG TTGAAATCAG TCCGAATGCC
GAGCCGCCGG TTTGCCGAAT CATGGATTAC GGCAAGTTCC TCTATGAGAA GAGTAAGGCC
ACAAAGGAAC AGAAGAAGAA GCAAAAAGTT ATTCAGGTCA AGGAAATCAA ATTCCGACCT
GGTACCGATG ATGGCGACTA TCAGGTCAAA CTACGCAACC TGATTCGCTT TCTGGAAGAT
GGTGACAAAG CCAAAATCAC ACTGCGTTTC CGCGGTCGTG AAATGGCGCA CCAACAGATT
GGTATCGAAG TGCTTAACCG CGTTCGTGAC GATCTGAGTG AACTGGCTGT CGTCGAATCC
TTCCCTACGA AGATCGAAGG CCGTCAGATG ATCATGGTGC TAGCACCGAA GAAGAAACAG
TAA
 
Protein sequence
MKGGKRVQPA RPNRINREIR AHEVRLTGVE GEQLGIVSLN EALEKAEEAG VDLVEISPNA 
EPPVCRIMDY GKFLYEKSKA TKEQKKKQKV IQVKEIKFRP GTDDGDYQVK LRNLIRFLED
GDKAKITLRF RGREMAHQQI GIEVLNRVRD DLSELAVVES FPTKIEGRQM IMVLAPKKKQ