| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1888 |
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| Symbol | |
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| ID | 8132831 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 2180459 |
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| End bp | 2182387 |
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| Gene Length | 1929 bp |
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| Protein Length | 642 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644865177 |
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| Product | threonyl-tRNA synthetase |
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| Protein accession | YP_003017465 |
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| Protein GI | 253688275 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0441] Threonyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00418] threonyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAGTTA TCACCCTTCC TGATGGAAGT CAGCGTCATT ACGACCATGC CGTTTCTCCC
CTGGATGTTG CACTCGATAT CGGCCCCGGT CTGGCAAAGG CCTGTATCGC CGGACGTGTC
AATGGCGAGT TAGTTGACGC CAGCGATAAG ATCGATACCG ATGCGCAGTT AGCCATCATC
ACTGCCAAAG ATGAAGCGGG TCTGGAAATT ATTCGTCACT CCTGTGCGCA TTTGTTGGGT
CATGCGATCA AGCAATTGTG GCCAGATACC AAAATGGCGA TCGGTCCGGT TATCGATAAC
GGTTTTTACT ATGACGTAGA TATCGACCGT ACCCTGACTC AGGAAGATAT TGAACTGCTT
GAAAAGCGTA TGCACGAGCT TGCTGACACT GACTATGACG TCATTAAGAA AAAAGTCAGT
TGGCAGGAAG CGCGCGACGC GTTCGCTGCA CGCGGTGAGA CCTACAAAAT GGCGATTCTG
GATGAGAACA TCAGTCGTGA TGATCGTCCG GGTCTGTATC ACCATGAAGA ATACATCGAT
ATGTGCCGTG GTCCGCACGT ACCGAATATG CGTTTCTGCC ATCATTTCAA ATTGCAGAAA
ACGTCAGGCG CTTACTGGCG CGGCGACAGC AAAAACAAAA TGCTGCAACG CATCTACGGC
ACTGCCTGGG CAGATAAAAA GCAGTTGGCT TCTTACCTGC AACGTCTGGA AGAAGCGGCT
AAGCGCGACC ATCGCAAGAT CGGCAAACAG CTGGACCTGT ATCACATGCA GGAAGAAGCG
CCGGGTATGG TGTTCTGGCA CAACGACGGT TGGACGATCT TCCGTGAGTT GGAAGCGTTT
GTGCGTATGA AGCTGAAGTC GTACCAGTAT CAGGAAGTAA AAGGTCCATT CATGATGGAT
CGCGTGATGT GGGAAAAAAC CGGTCACTGG GAAAACTACA AAGAAGCGAT GTTCACGACC
TCATCAGAGA ACCGTGAATA CTGCATCAAG CCGATGAACT GCCCGGGTCA CGTACAGATT
TTCAATCAGG GATTGAAATC ATACCGCGAT CTGCCGCTGC GTATGGCTGA GTTCGGTAGC
TGTCACCGTA ATGAACCATC AGGCTCTCTG CATGGCTTAA TGCGCGTGCG TGGCTTTACC
CAGGACGATG CGCACATCTT CTGTACGGAA GAGCAGGTTC GCGATGAAGT GAACAGCTGC
ATCAAGATGG TTTATGACAT GTACAGCACC TTCGGTTTTG AAAAAATCGT GGTGAAACTG
TCTACACGTC CTGAAAAACG TATCGGTAGC GATGAGATGT GGGATCGCGC TGAAGCCGAT
TTGGCCGCAG CGTTGACTGA AAATAACATC GAATTTGACT ATCAGCCGGG TGAAGGGGCG
TTCTACGGCC CAAAAATTGA ATTTACCCTG CATGACTGTT TGGATCGTGC GTGGCAGTGT
GGTACGGTGC AACTCGACTT TTCATTACCG GGTCGCCTGA ATGCGTCTTA CGTTGGCGAA
AGCAACGAAC GTCAGGTGCC GGTTATGATT CACCGGGCTA TTTTGGGATC AATGGAGCGT
TTCATCGGTA TTCTGACCGA AGAATTCGCC GGTTTCTTCC CAACCTGGTT AGCTCCGGTT
CAAGTAGTGA TTATGAATAT CACGGATACT CAGTCTGATT ATGTCAACGA ATTGACCCGA
AAACTGCAAG AAGCGGGCAT TCGAGTAAAA GCAGACTTGA GAAATGAGAA GATAGGCTTT
AAAATCCGCG AGCACACTTT ACGGCGGGTT CCCTATATGC TGGTTTGTGG CGACAAAGAA
GTTGAGGCAG GAAAAGTTGC TGTCCGTACT CGTCGCGGTA AAGACCTGGG GAGCCTGGAT
GTCAGTGAAG TCATCAGTAA GCTGCAGCAA GAGATTCGCA GCCGTAGTCT TCATCAATTG
GAGGAATAA
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| Protein sequence | MPVITLPDGS QRHYDHAVSP LDVALDIGPG LAKACIAGRV NGELVDASDK IDTDAQLAII
TAKDEAGLEI IRHSCAHLLG HAIKQLWPDT KMAIGPVIDN GFYYDVDIDR TLTQEDIELL
EKRMHELADT DYDVIKKKVS WQEARDAFAA RGETYKMAIL DENISRDDRP GLYHHEEYID
MCRGPHVPNM RFCHHFKLQK TSGAYWRGDS KNKMLQRIYG TAWADKKQLA SYLQRLEEAA
KRDHRKIGKQ LDLYHMQEEA PGMVFWHNDG WTIFRELEAF VRMKLKSYQY QEVKGPFMMD
RVMWEKTGHW ENYKEAMFTT SSENREYCIK PMNCPGHVQI FNQGLKSYRD LPLRMAEFGS
CHRNEPSGSL HGLMRVRGFT QDDAHIFCTE EQVRDEVNSC IKMVYDMYST FGFEKIVVKL
STRPEKRIGS DEMWDRAEAD LAAALTENNI EFDYQPGEGA FYGPKIEFTL HDCLDRAWQC
GTVQLDFSLP GRLNASYVGE SNERQVPVMI HRAILGSMER FIGILTEEFA GFFPTWLAPV
QVVIMNITDT QSDYVNELTR KLQEAGIRVK ADLRNEKIGF KIREHTLRRV PYMLVCGDKE
VEAGKVAVRT RRGKDLGSLD VSEVISKLQQ EIRSRSLHQL EE
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