| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1887 |
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| Symbol | |
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| ID | 8132830 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 2178798 |
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| End bp | 2180198 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644865176 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_003017464 |
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| Protein GI | 253688274 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0805194 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAATG CGCAAAACAA CATAGCAAAT GATCAGCAGG AGTTGGTTTT AAAACGAGGG
TTAAAAAACC GACATATCCA ACTGATAGCG CTGGGTGGCG CTATTGGTAC CGGATTGTTT
TTAGGAATAT CGCAGACAAT CCAAATGGCA GGGCCGTCCG TTTTATTGGG CTACGCGATT
GCGGGAATGA TTGCGTTTCT GATTATGCGA CAGTTGGGTG AGATGGTGGT GGAAGAGCCC
GTAGCGGGTT CATTTAGCCA TTTTGCCTAT AAATACTGGG GCGATTTTGC GGGCTTTCTG
GCCGGTTGGA ACTACTGGGC GATGTTTATT CTGGTAGGGA TGGCTGAACT GACGGCCGTG
GGGATTTATA TCCAATACTG GTGGCCTGAG ACACCAACAT GGCTGTCCGC CGCGATATTC
TTCGTACTGA TTAACCTGAT CAATTTGGTG AATGTGCGGA TGTTTGGTGA AACGGAATTC
TGGTTCGCCA TTATCAAAGT GCTGGCCATC GTCGGGATGA TAGTCTTCGG TAGCTGGTTG
TTGCTGAGTG GCAATGGCGG CGAAACGGCC ACGGTGCGCA ACTTATGGAT TCATGGCGGA
TTCATGCCGA ATGGCGCAAG TGGATTGATC ATGGCGATGG CCGTGATTAT GTTTTCATTC
GGCGGACTCG AATTGGTAGG TATCACCGCT GCGGAAGCTG CCGATCCGAA ACGTTCTATC
CCTCAGGCGA CTAATCAGGT GGTTTACCGC ATCCTGATTT TCTATATCGG CGCGTTGTCT
ATTTTGTTAT CGCTTTATCC GTGGGGGAAT GTCGTCGATG GCGGTAGCCC GTTTGTTCTT
ATCTTCCATG CGCTGAACAG CAATATAGTG GCAAACGTAC TTAACATTGT GGTACTGACA
GCCGCGTTAT CGGTTTACAA CAGCGGCGTG TACTGCAATA GCCGGATGCT GTACGGTTTG
GCAAAGCAGG GGAATGCGCC AAAGTCTCTC GCGAAGGTCA ATGCGCGCGG TGTCCCCGTT
CGCTCTATCG CGCTATCAGC ACTAGCGACG TCCTTCGGTG TGGCGATCAA CTACCTGATG
CCAGGCAAAG CCTTTGAGCT GCTGATGGCA CTGGTGGTGT CGACGCTGGT GATTAACTGG
ATCATGATCT GCTTTGCGCA CCTGCGTTTC CGTCAGGCGA TGATTGAGAA GGGGATTGTC
CCTGCATTCA AAGCCTTCTG GTATCCGTGG GGCAATTACG TGTGTCTGGC GTTTCTGGCG
GGGATTTTAG TGATTATGCT GCTGTCGCCG GGAATTCGCA TTTCGGTCAT TTTAATTCCG
TTCTGGATTG CTGTTATTTG GCTTGGTTTC CGATTTTCCC GCAAAAATAA CGCGGCGTTG
AAATCGACGC AAACACAGTA A
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| Protein sequence | MANAQNNIAN DQQELVLKRG LKNRHIQLIA LGGAIGTGLF LGISQTIQMA GPSVLLGYAI
AGMIAFLIMR QLGEMVVEEP VAGSFSHFAY KYWGDFAGFL AGWNYWAMFI LVGMAELTAV
GIYIQYWWPE TPTWLSAAIF FVLINLINLV NVRMFGETEF WFAIIKVLAI VGMIVFGSWL
LLSGNGGETA TVRNLWIHGG FMPNGASGLI MAMAVIMFSF GGLELVGITA AEAADPKRSI
PQATNQVVYR ILIFYIGALS ILLSLYPWGN VVDGGSPFVL IFHALNSNIV ANVLNIVVLT
AALSVYNSGV YCNSRMLYGL AKQGNAPKSL AKVNARGVPV RSIALSALAT SFGVAINYLM
PGKAFELLMA LVVSTLVINW IMICFAHLRF RQAMIEKGIV PAFKAFWYPW GNYVCLAFLA
GILVIMLLSP GIRISVILIP FWIAVIWLGF RFSRKNNAAL KSTQTQ
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