| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1878 |
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| Symbol | |
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| ID | 8132821 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 2168233 |
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| End bp | 2169978 |
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| Gene Length | 1746 bp |
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| Protein Length | 581 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644865167 |
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| Product | signal transduction histidine kinase, LytS |
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| Protein accession | YP_003017455 |
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| Protein GI | 253688265 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3275] Putative regulator of cell autolysis |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.770711 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCACGAAA TATTTGAGAT GCTCCTTGCG GTCTTTGACC GCGCCGCGCT GATGCTGATT
TGCCTGTTTT TCCTCACCAG AACACGCCAG TTCCGGCAAT TACTGCAAAA AGAGCAACAC
TCGCCGGGAG AGCGAGCGAC AGTGACCGCC ATCTTTTCAC TGTTTGCGCT GTTCGGTACC
TATTCCGGTA TTAATGTTGA AGGGTCTCTC GTCAACGTGC GCGTCATTGC CGTGATGTCT
GGCGGTATTC TCTTCGGCCC CTGGGTGGGG ATTGCGACGG GTATCATTGC GGGAGTGCAC
CGTTATCTCA TTGATATCGA TGGCATCACT TCCGTGCCTT GCCTGATTAC CAGCATCATC
GCCGGTATCA CTTCTGGCTA CATCAATAAG AAAGTCAAAA AAGAGCAGCA GTGGAGCATC
GGGATTCTGG GCGGCATGTT GTGTGAGTCG TTAACTATGC TGCTGGTTGT GGCATGGGCG
ACGCCTATAG CGTTAGGGCT GGATATTGTT TCAAAAATTG CGGTGCCGAT GATTCTCGGC
TCTGTCTGTA TTGGCCTGAT CGTCTTGCTG GTACAGAGCG TGGCGAATGA AAAAGAGGTG
ATTGCTGCCA GGCAAGCCAA GCTCGCACTG GATATCGCGC ATAAAACTCT GCCGTATTTC
CGCAATATTA ACAGTGATTC ACTGACGGCT ATCTGTCGCA TTATTCGTAC TGAGATTAAT
GCGGACGCGG TGGCGATAAC GAATACGCAG CATATTCAGG CTTATGTGGG GATTGGGGAA
GAAAAATATA ATATCGGCCA CGACATTATC AGTCCAATGA CGCAACAGGC GATTCATGAC
GGGAAAATCA TCATTAAAAA TAATGATGAA CAGCACCTGA CGCCGGAAAT CCATTCGATG
ATTGTCATTC CGTTGTGGGA ACACGGGCAG GTGACCGGGA CGCTGAAAAT CTATTATCGC
CATGCCCACA AAATTACCTA TTCATTACGC GTGATGGCCG TCGGTTTATC ACAAATCATG
TCAACGCAAA TTGAGGTATC CCGCACCGAG CAACTGCGTG ATATGGCAAA TAAGGCGGAA
CTGAGAGCGC TGCAAAGTAA AATCAATCCG CACTTTCTTT TTAATGCGCT GAACGCGATC
TCCTCATCGA TTCGTATTAA TCCCGATACC GCGCGTCAGT TGGTGATCAA TCTGTCTCGG
TATTTGCGCT ATAACCTTGA GCTTAACGAT GATGCGCTGA TCGATATAAA AAAAGAGCTG
TACCAAATAC AGGATTATAT CGCGATTGAG CAGGCGCGAT TTGGCGCCAA GCTCACGGTG
ATTTACGACA TCGATGACGA TCTGGCGTAT AAGATCCCCA GCTTATTAAT TCAGCCGCTG
GTAGAAAACG CGATTGTGCA TGGTATTCAG CCTTGCAGAG GTAAAGGAAC CGTGGTGCTG
TCTGTGAAGG AACTGGGCGA CAGATTGCTG GTGGCGGTAA AAGACACGGG GCACGGCATC
AGTCAGGAAA CGATGGATCG CGTCGCGCGC AATGAACTAC CGGGGAATAA AATCGGCCTG
CTGAATGTCC ATCACCGGGT TCGCCTGCTC TATGGCGATG GTCTGCATAT TCGCCGTCTG
GAACCCGGAA CCGAGATTTA TTTCTACATC CCACGAGAAG ATAAAATACC GTCGGCCTTG
CCGGATACCG TTCAGGTGCC GCAGCCGGGA TATTCTGCTG CTGAACAAAC AGGAGGCAAC
CCATGA
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| Protein sequence | MHEIFEMLLA VFDRAALMLI CLFFLTRTRQ FRQLLQKEQH SPGERATVTA IFSLFALFGT
YSGINVEGSL VNVRVIAVMS GGILFGPWVG IATGIIAGVH RYLIDIDGIT SVPCLITSII
AGITSGYINK KVKKEQQWSI GILGGMLCES LTMLLVVAWA TPIALGLDIV SKIAVPMILG
SVCIGLIVLL VQSVANEKEV IAARQAKLAL DIAHKTLPYF RNINSDSLTA ICRIIRTEIN
ADAVAITNTQ HIQAYVGIGE EKYNIGHDII SPMTQQAIHD GKIIIKNNDE QHLTPEIHSM
IVIPLWEHGQ VTGTLKIYYR HAHKITYSLR VMAVGLSQIM STQIEVSRTE QLRDMANKAE
LRALQSKINP HFLFNALNAI SSSIRINPDT ARQLVINLSR YLRYNLELND DALIDIKKEL
YQIQDYIAIE QARFGAKLTV IYDIDDDLAY KIPSLLIQPL VENAIVHGIQ PCRGKGTVVL
SVKELGDRLL VAVKDTGHGI SQETMDRVAR NELPGNKIGL LNVHHRVRLL YGDGLHIRRL
EPGTEIYFYI PREDKIPSAL PDTVQVPQPG YSAAEQTGGN P
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