Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1870 |
Symbol | |
ID | 8132813 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 2159237 |
End bp | 2159683 |
Gene Length | 447 bp |
Protein Length | 148 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644865159 |
Product | NUDIX hydrolase |
Protein accession | YP_003017447 |
Protein GI | 253688257 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1051] ADP-ribose pyrophosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0662124 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTAAGC CCCATGTGAC AGTGGCCTGT GTGGTACAGG CCGAAAACCA TTTTCTGGTC GTCGAAGAGT TGATTAACGA TAAATTATTG TGGAATCAGC CGGCAGGCCA TCTGGAAGCG GACGAAACGC TGATTCAGGC GGCAAGCCGT GAACTGTGGG AAGAAACCGG CATTCAGGCC ACGCCGCAGA GTTTCTTACG TCTGCACCAA TGGATCGCGC CCGACAGCAC GCCCTTTTTA CGCTTTTGCT TCGCACTCGA TCTGCCTAAG CGGGTCGCAA CCCAGCCGCA TGACAGTGAT ATCGAATGCT GCCGCTGGCT GACCGCCGAG GAAATTCTGC ATTCTCGCCA GCTTCGTTCG CCGCTGGTGG CTGAAAGTAT CCGCTGCTAT CAGCAGCCAG AACGCTATCC GTTAACAGTA CTGGGCGCGT TCAACTGGCC GTTCTAG
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Protein sequence | MFKPHVTVAC VVQAENHFLV VEELINDKLL WNQPAGHLEA DETLIQAASR ELWEETGIQA TPQSFLRLHQ WIAPDSTPFL RFCFALDLPK RVATQPHDSD IECCRWLTAE EILHSRQLRS PLVAESIRCY QQPERYPLTV LGAFNWPF
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