Gene PC1_1870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1870 
Symbol 
ID8132813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp2159237 
End bp2159683 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content55% 
IMG OID644865159 
ProductNUDIX hydrolase 
Protein accessionYP_003017447 
Protein GI253688257 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0662124 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAAGC CCCATGTGAC AGTGGCCTGT GTGGTACAGG CCGAAAACCA TTTTCTGGTC 
GTCGAAGAGT TGATTAACGA TAAATTATTG TGGAATCAGC CGGCAGGCCA TCTGGAAGCG
GACGAAACGC TGATTCAGGC GGCAAGCCGT GAACTGTGGG AAGAAACCGG CATTCAGGCC
ACGCCGCAGA GTTTCTTACG TCTGCACCAA TGGATCGCGC CCGACAGCAC GCCCTTTTTA
CGCTTTTGCT TCGCACTCGA TCTGCCTAAG CGGGTCGCAA CCCAGCCGCA TGACAGTGAT
ATCGAATGCT GCCGCTGGCT GACCGCCGAG GAAATTCTGC ATTCTCGCCA GCTTCGTTCG
CCGCTGGTGG CTGAAAGTAT CCGCTGCTAT CAGCAGCCAG AACGCTATCC GTTAACAGTA
CTGGGCGCGT TCAACTGGCC GTTCTAG
 
Protein sequence
MFKPHVTVAC VVQAENHFLV VEELINDKLL WNQPAGHLEA DETLIQAASR ELWEETGIQA 
TPQSFLRLHQ WIAPDSTPFL RFCFALDLPK RVATQPHDSD IECCRWLTAE EILHSRQLRS
PLVAESIRCY QQPERYPLTV LGAFNWPF