Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1869 |
Symbol | mnmA |
ID | 8132812 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 2157992 |
End bp | 2159098 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644865158 |
Product | tRNA-specific 2-thiouridylase MnmA |
Protein accession | YP_003017446 |
Protein GI | 253688256 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.63083 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGATA ACAGCCAGAA AAAAGTGATT GTCGGTATGT CCGGCGGTGT TGATTCCTCC GTTTCCGCTT ACCTGTTACA GCAACAGGGC TATCATGTTG AAGGCCTGTT CATGAAGAAC TGGGAAGAGG ACGACGACAC GGAATATTGC TCAGCAGCCA CTGACCTCGC CGATGCGCAG GCCGTTTGCG ACAAGCTGGG TATCGAGTTG CATACCGTCA ACTTTGCCGC TGAATATTGG GACAACGTGT TTGAACTCTT CCTTGAAGAA TACAAAGCGG GCCGTACTCC CAATCCCGAT ATTCTGTGCA ATAAAGAAAT CAAATTCAAA GCCTTCCTGG AATTCGCCGC CGAGGATCTC GGAGCCGACT ATATCGCGAC AGGCCACTAT GTTCGTCGTC ACGACGTTGA CGGCAAAAGC CGTTTGCTGC GCGGCATGGA CGGCAACAAA GACCAGAGCT ATTTTCTTTA TACGCTGAGC CACGAGCAGA TCGCACAAAG TCTGTTCCCC GTCGGCGAAC TGGAAAAACC GCAGGTGCGC AAGATCGCCG AAGAGCTCGA GCTGGCAACC GCGAAGAAGA AAGACTCTAC CGGTATCTGC TTTATCGGCG AGCGCAAATT CACTGATTTT CTGGCGCGCT ACCTGCCCGC ACAGCCGGGT CCGATTCTGT CCGTCGATGA CAACAAACCG ATGGGGCAAC ATCAAGGGCT GATGTACCAC ACGTTAGGAC AGCGTAAAGG CTTGGGCATC GGCGGCGTCA AAGATGGCGG CGAAGATCCT TGGTACGTGG TGGATAAAGA TGTCGCCAAC AATATTCTGT ATGTCGCACA GGGCCACGAA CACCCTCGCC TGATGTCGCA CGGCTTAATC GCACAGCAGT TGCATTGGGT TGACCGTCAG CCGCTAACCG CTGAATTACG TTGTACGGTG AAAACCCGTT ACCGTCAGGC GGACATCCCT TGCACCGTCA CGCCGCTTGG CGACGATCGT ATTACCGTGC GTTTTGATGA GCCCGTTGCA GCCGTAACGC CCGGCCAATC CGCCGTTTTT TATCTGGACG ACGTGTGCCT TGGCGGCGGC ATCATTGAAG AACGCTTACA GGAGTAA
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Protein sequence | MSDNSQKKVI VGMSGGVDSS VSAYLLQQQG YHVEGLFMKN WEEDDDTEYC SAATDLADAQ AVCDKLGIEL HTVNFAAEYW DNVFELFLEE YKAGRTPNPD ILCNKEIKFK AFLEFAAEDL GADYIATGHY VRRHDVDGKS RLLRGMDGNK DQSYFLYTLS HEQIAQSLFP VGELEKPQVR KIAEELELAT AKKKDSTGIC FIGERKFTDF LARYLPAQPG PILSVDDNKP MGQHQGLMYH TLGQRKGLGI GGVKDGGEDP WYVVDKDVAN NILYVAQGHE HPRLMSHGLI AQQLHWVDRQ PLTAELRCTV KTRYRQADIP CTVTPLGDDR ITVRFDEPVA AVTPGQSAVF YLDDVCLGGG IIEERLQE
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