| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1862 |
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| Symbol | potA |
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| ID | 8132805 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2149266 |
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| End bp | 2150381 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644865151 |
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| Product | putrescine/spermidine ABC transporter ATPase protein |
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| Protein accession | YP_003017439 |
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| Protein GI | 253688249 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.194721 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGAAA ACTCCCTGGC TGTGCCGGTC GTTGAATTGC TCAACGTCCA TAAAGGCTTT
GATGGTAAAG ACATCATTTC ACATTTTAAT CTCACCATTA ATAACGGTGA GTTCCTGACG
ATCCTCGGGC CATCCGGCTG CGGCAAAACC ACCGTACTGC GCCTGATTGC CGGTCTGGAA
ACGGTCGATA GCGGCAATGT CATGCTGGAA AAGCAGGACA TCACCCACCA GCCGGCCGAG
CAGCGACACG TTAATACTGT ATTTCAAAGT TACGCCCTGT TTCCTCACCT CAGCGTGTTT
GAGAACGTGG CGTTTGGCCT GCGTATGCAA AAAACGCCCG CCGCAGAGAT TGCACCACGC
GTGATTGACG CGCTGAAAAT GGTGCAGTTG GAAGAACTGG CGCAACGTCG CCCGCACCAG
TTGTCCGGCG GCCAGCAACA GCGCGTGGCT ATCGCCCGCG CCGTCGTCAA TCAACCAAAA
GTTCTGCTGC TGGATGAATC CCTGTCCGCG CTCGATTATA AGCTACGTAA GCAGATGCAG
AATGAGCTGA AAGCACTGCA ACGTAAGCTG GGTATCACCT TTATTTTCGT CACGCACGAT
CAGGAAGAAG CCCTGACCAT GTCCGACCGT ATCGTGGTGA TGCGTGATGG ACGCATCGAG
CAAGACGGCA CGCCGCGTGA AATCTACGAA GAACCGAAAA ATCTGTTCGT CGCTAGCTTT
ATCGGTGAAA TCAATATTTT TGATGCGATC GTACTGGAAC CGTTGGACGA ACAGCGGGTT
CGCGCTCAGG TCGAAGGCCA CGAGTGCACT ATTACCGTCA GTTTCCCGGT CACCGTCGGC
CAACACCTCA ACGTGCTGCT ACGACCAGAA GATTTACGCG TCGAAGAACT GGGCGACGGT
ATGCAGGCGG AAGGCATGGT GGGCTACGTG CGCGAACGCA ACTATAAAGG CATGACGCTG
GAATCCAATA TCGAGTTGGA AAACGGCAAA ATGGTCATGG TCAGCGAGTT CTTTAACGAA
GACGATCCCG ACTTCGACCA TTCACTCAAC CAGAAAGTCG ACGTCACCTG GGTGGAAAGC
TGGGAGGTCG TTCTGCACGA TGAAGAAGTC GCGTAA
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| Protein sequence | MKENSLAVPV VELLNVHKGF DGKDIISHFN LTINNGEFLT ILGPSGCGKT TVLRLIAGLE
TVDSGNVMLE KQDITHQPAE QRHVNTVFQS YALFPHLSVF ENVAFGLRMQ KTPAAEIAPR
VIDALKMVQL EELAQRRPHQ LSGGQQQRVA IARAVVNQPK VLLLDESLSA LDYKLRKQMQ
NELKALQRKL GITFIFVTHD QEEALTMSDR IVVMRDGRIE QDGTPREIYE EPKNLFVASF
IGEINIFDAI VLEPLDEQRV RAQVEGHECT ITVSFPVTVG QHLNVLLRPE DLRVEELGDG
MQAEGMVGYV RERNYKGMTL ESNIELENGK MVMVSEFFNE DDPDFDHSLN QKVDVTWVES
WEVVLHDEEV A
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