| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1854 |
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| Symbol | |
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| ID | 8132797 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2141582 |
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| End bp | 2142439 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644865143 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_003017431 |
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| Protein GI | 253688241 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.191577 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCGTAT TACGCTCAGC GACTCCGCCT CTTCGTGAGG CGGGCTGGAC ATTGCCGTCA
AGCCAGCCGC TACAGCGGTA TGGCCTGTGT GCATTAGCGC AACCCCACTT ACGCACACCG
CAGCAGACAA CGCGTTTTCA TTTTTATGAG GCCACGCTTC TGTTGGTTCT CTCTGGTCGA
TTGACTATTC TCGAACAGAA CAACACGACG GTTGTCGATA GCCCGTCTCA GCTTTGCCTG
ATTACGTCTG GTGCAAGTGC AGATTTAACA AAGACGCCCG GCGGTCATGA CTCTGTCTTT
CGGTCAATCT TCCTGACGTT TTCATCCACG CTTCTGGCGC AGTTTTATCA TCGCTACCCT
GAAAAATTGC CGTCAGCACA CCATTCTGCC CCCTTCACGC CCCTCGCGTT GGATGACGAT
ATGACCTGCA CACTGCAGTA TCTGGTGAAG GGAATAACAG ACAACACGCT GCCCGAAGAG
CGTCTCGCAC TGCGTCTGAT GGATATGCTG CTGGTGCTGT CGGAACGGGG ATACCATTTT
GGCGCACCGC CGCAGCCTGG CATTACAGCA CAGCTACGTG CGCTTATCAG CGAAGAGCCG
GAATATTACT GGACGGCACA GTCTGCGGGG CGACGGCTGG CGATGAGCGA AGCCACGCTG
CGCCGGAGGC TATCCGCCGA GCAGACACGT TTTGAGGTGC TGCTGCTGGA GACGCGAATG
CAACACGCGA TGATGCTGGT ACAGACGACG TCATGGAGTA TGCAGCGTCT GGCTGAAGCC
TGCGGGTATA AATCCTCGGC GCGTTTTTCC GAACGGTTCA AAACCCGTTT TGGCTGTTCA
CCCACCAAGA TTCGTTAA
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| Protein sequence | MTVLRSATPP LREAGWTLPS SQPLQRYGLC ALAQPHLRTP QQTTRFHFYE ATLLLVLSGR
LTILEQNNTT VVDSPSQLCL ITSGASADLT KTPGGHDSVF RSIFLTFSST LLAQFYHRYP
EKLPSAHHSA PFTPLALDDD MTCTLQYLVK GITDNTLPEE RLALRLMDML LVLSERGYHF
GAPPQPGITA QLRALISEEP EYYWTAQSAG RRLAMSEATL RRRLSAEQTR FEVLLLETRM
QHAMMLVQTT SWSMQRLAEA CGYKSSARFS ERFKTRFGCS PTKIR
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