| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1853 |
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| Symbol | |
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| ID | 8132796 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 2139426 |
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| End bp | 2141441 |
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| Gene Length | 2016 bp |
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| Protein Length | 671 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644865142 |
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| Product | carboxy-terminal protease |
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| Protein accession | YP_003017430 |
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| Protein GI | 253688240 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0793] Periplasmic protease |
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| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.535922 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAACT TAGTCAGAAT AACCGCCATC GCAGGCTTAC TGCTGGCGGG CTCTAGTTTT
GCAAATGAAA ATATTACGCG TGTTGATCAG ATTCCTCAGC TACATCAGGA ACCTCAACAT
GCCACCGTTA GCGACCGGGT GGCCTCACGT TTTCTGCGTT CGCATTACCG CCAGTTTATG
CTGGATGCGC AGTTCTCTGA GAAGATTTTT AATCGCTACC TCAACATGCT GGACTACAGC
CACAACGTGC TGTTGGCCTC TGATATCGCG CAGTTTTCCG GGCAAAAAGC CCAGTTGGGC
GATGCGTTGA AATCGGGCCA GTTGGATGTG CCGTACGCGC TGTACAATCT GGCGCAGAAG
CGTCGGTTTG AGCGTTTTCA ATATGCGCTG TCGCTGCTGG ATAAACCGGT CGATCTGACG
GGCAATGACA CGTTTGAGCT TGACCGCAGC AAAGCCCCTT GGCCGCAGAA TGTCGGTGAG
CTTAACCGCC TGTGGGATGC CAAGGTAAAA TATGACTGGC TCAGCCTGAA GCTGACCGGT
AAAGATGATA AAGACATCAA AGAGACGCTG ACCAAGCGTT ACCAGTTTGC GATTCGCCGC
TTGGCGCAGA GCAACAGCGA AGATGTTTTC CAACTTGTCA TGAACGCCTT TGCGCGTGAA
ATTGACCCGC ATACCAGCTA CCTGTCACCG CGTAACACCG AGCAATTCAA CACCGAAATG
AGCCTGTCGC TCGAAGGGAT TGGTGCGGTG CTGCAGATGG ATGACGACTA CACCATGATT
AATTCTATGG TGCCCGGTGG TCCGGCTGCG AAAAGCAAAA ACATTACCGT GGGTGACCGT
GTGGTTGGCG TCGGCCAAAA CGGCAAGCCA ATGGTGGATG TCATCGGTTG GCGTTTGGAT
GATGTGGTCG CACTGATCAA AGGGCCGAAA GGCAGTAAGG TGCGTCTGGA AATTCTGCCC
GCAGGCAAAG GGACGAAGAC CCGTATTGTT ACGCTGACGC GCGAACGTAT CCGCCTTGAA
GACCGTGCGG TCAAAATGTC CGTCAAGACA GTCGGCAAAG ATAAAGTTGG CGTGCTGGAT
ATCCCCGGTT TCTATGTCGG CCTGACGGAT GACGTAAAAG TTCAGCTCCA GAAGCTGGAA
AAACAGAACG TCAGCAGCAT TGTGATTGAC TTACGTACTA ACGGCGGCGG TGCGCTGACG
GAAGCGGTAG GACTTTCCGG CCTGTTTATT CCTAGTGGCC CTGTAGTTCA GGTGCGCGAT
AATAATGGCA AAGTGCGTGA AGACAGCGAC ACCGACGGCA TTGTGTATTA CAAAGGCCCG
CTGGTGGTAC TGGTAGACCG CTTCAGTGCT TCCGCTTCCG AGATCTTTGC GGCGGCGATG
CAGGATTATG GCCGTGCCTT GATCGTGGGT GAACCGACGT TTGGTAAAGG CACCGTGCAG
CAGTATCGCT CGCTGAATCG GATTTACGAT CAGATGCTGC GTCCCGACTG GCCAGCGCTG
GGTTCCGTGC AATACACGAT TCAGAAGTTC TATCGCATTG ACGGTGGCAG TACTCAGATG
AAAGGCGTGA CGCCTGATGT GATGATGCCA ACCGGCACGG AAACAGTAGA TACCGGCGAG
AAGTTTGAAG ACAACGCGCT ACCGTGGGAC AGCATCAAAG CGGCTAACTA CACGAAGAGT
GGCGATCTGA AAGCGCTGAT TAGCACACTG AATGAGCATC ATCAGGAGCG TATCGCCAAA
GATCCTGAGT TCCAGTACGT CGCGCAAGAT ATTGCCCGCT ACAACGCGCT GAAGGATAAG
CGCAACATCG TGTCGCTCAA TCTTGCTCAG CGTGAGAAAG AGAATGATGA CGATGAAGCG
ATGCGTCTGA AGCGGATTAA CGATCGACTG GCGAGAGAAG GTAAGAAACC ACTCAAATCG
CTGGAAGATT TGCCGAAAGA TTATCAGGCT CCCGATCCTT ATCTGGATGA AACAGTGAAG
ATCGCTCACG ATTTAGCGCA GGAACAGAAA GACTGA
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| Protein sequence | MNNLVRITAI AGLLLAGSSF ANENITRVDQ IPQLHQEPQH ATVSDRVASR FLRSHYRQFM
LDAQFSEKIF NRYLNMLDYS HNVLLASDIA QFSGQKAQLG DALKSGQLDV PYALYNLAQK
RRFERFQYAL SLLDKPVDLT GNDTFELDRS KAPWPQNVGE LNRLWDAKVK YDWLSLKLTG
KDDKDIKETL TKRYQFAIRR LAQSNSEDVF QLVMNAFARE IDPHTSYLSP RNTEQFNTEM
SLSLEGIGAV LQMDDDYTMI NSMVPGGPAA KSKNITVGDR VVGVGQNGKP MVDVIGWRLD
DVVALIKGPK GSKVRLEILP AGKGTKTRIV TLTRERIRLE DRAVKMSVKT VGKDKVGVLD
IPGFYVGLTD DVKVQLQKLE KQNVSSIVID LRTNGGGALT EAVGLSGLFI PSGPVVQVRD
NNGKVREDSD TDGIVYYKGP LVVLVDRFSA SASEIFAAAM QDYGRALIVG EPTFGKGTVQ
QYRSLNRIYD QMLRPDWPAL GSVQYTIQKF YRIDGGSTQM KGVTPDVMMP TGTETVDTGE
KFEDNALPWD SIKAANYTKS GDLKALISTL NEHHQERIAK DPEFQYVAQD IARYNALKDK
RNIVSLNLAQ REKENDDDEA MRLKRINDRL AREGKKPLKS LEDLPKDYQA PDPYLDETVK
IAHDLAQEQK D
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