| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1852 |
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| Symbol | |
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| ID | 8132795 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 2138648 |
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| End bp | 2139406 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644865141 |
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| Product | putative solute/DNA competence effector |
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| Protein accession | YP_003017429 |
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| Protein GI | 253688239 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3109] Activator of osmoprotectant transporter ProP |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.106932 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAAAATC AACCTAAGTT GAACAGTAGT AAAGAAGTTA TTGCCTTTTT GGCAGAGCGG
TTCCCGCTTT GTTTCACCAC TGAAGGTGAA ACTCGTCCGT TAAAAATCGG TATTTTTCAA
GATCTTGTTG AGCGTGTACC CGAGTCCGAT AACGTCAGTA AGACGCAATT ACGCTCTGCG
TTGCGCCTTT ACACCTCAAG CTGGCGCTAT CTGTACGGTG TAAAATTGGG TGCTCAACGT
GTCGATCTGG ACGGTAATCC GTGTGGCGAG TTGGAACAGC AGCATGTCGA TCATGCCCGC
ACGCAGTTAG AAGAAGCGAA AGCGCGAGTT CAGGCTCAGC GTGCTGAGCA ACAGGCGAAA
AAACGTGAAG CAGCCGGAGA GTCGGCAGAC GCAGCGCGTA CCCCTCGTCC TGCTCAGAAA
CGTGCGCCGC GTCGCGATGG TTCAAACAAT CCATCTCGAA GCAGCTCGTC TCAAACCCAT
GCATCGCGCA AACCTCGTCA GCCTTCTTCC GGTCAATCGC AGTCCTCTCC TCAGCAATCA
GCCAATGCTC AACAGCGTCA GGAAAAACCT GCCAGCAATG AGCGTCAGCG GGTTGCGGTT
ACGGATGTTT CCAAACTGCA AATCGGTCAG GAAATCAAAG TCAGAGCCGG CAAAGACGCC
ATGGATGCCA CCGTGCTTGA AATTGCCAAA GGCGAAGTCA GAGTACAATT GGCTTCTGGA
CTGGCAATGA TTGTACGCGC AGAACATTTG CAGTTCTGA
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| Protein sequence | MENQPKLNSS KEVIAFLAER FPLCFTTEGE TRPLKIGIFQ DLVERVPESD NVSKTQLRSA
LRLYTSSWRY LYGVKLGAQR VDLDGNPCGE LEQQHVDHAR TQLEEAKARV QAQRAEQQAK
KREAAGESAD AARTPRPAQK RAPRRDGSNN PSRSSSSQTH ASRKPRQPSS GQSQSSPQQS
ANAQQRQEKP ASNERQRVAV TDVSKLQIGQ EIKVRAGKDA MDATVLEIAK GEVRVQLASG
LAMIVRAEHL QF
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