| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1849 |
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| Symbol | |
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| ID | 8132792 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2133839 |
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| End bp | 2136481 |
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| Gene Length | 2643 bp |
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| Protein Length | 880 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644865138 |
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| Product | Mammalian cell entry related domain protein |
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| Protein accession | YP_003017426 |
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| Protein GI | 253688236 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3008] Paraquat-inducible protein B |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.608446 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGATA ATACGTCCGG GACACCAACC GAAGCGACGG TGAAAAACAA GCGTCGCCTG
TCACCTTTTT GGCTGCTGCC GCTGATTGCA CTGATGATTG CTGGCTGGTT GATTTACACC
AATCAGCAAG AACGTGGCGC CACCGTCACC ATTGATTTCG TCTCCGCCGA TGGGATTGTC
GCCGGGCGTA CTCCCGTGCG CTATCAGGGG GTGGAAGTCG GCACGGTGCA AAATATCAAA
CTGAGCGAAG ACCTGCGCAC CATACAGGTC GAAGCCAGTA TCAAAAGCGA TATGAAGGAA
GCGTTGCGCA GCGGTACGCA ATTCTGGCTA GTGACGCCGA AAGCCTCTCT TGCCGGGGTT
TCAGGACTGG ATGCGCTGGT GGGCGGCAAC TACATCGGTA TGATGCCCGG TTCCGGCGAG
GCGCAAGAGC ACTTTTCCGC GCTGGATACA CAGCCGAAAT ACCGCGTGAA TACCGGAGAG
TTGATGATTC ATCTCCATGC GGACGACCTC GGCTCACTGA ATACGGGCTC GCTGGTTTAC
TACCGTAAGA TCCCGGTGGG AAAAGTCTAC GACTATACGG TTTCTCAGGA TCGCCGCGGT
GTCATGATTG ACGTGCTGGT CGAACGCCGT TTTACCCATC TGGTGAAGAA GAATAGCCGC
TTCTGGAACG TGTCCGGCTT TAATGCAGAC ATCAGCGTCA GCGGTGCGAA AATTGAGATG
GAGAATCTGG CGGCGCTGGT TAACGGAGCA ATCGCGTTCG ATTCACCGGA AGAGAGCGAA
GACGCGAGTG CCGAGCAATC CTATCGCCTC TATCCCGATC TGGCACAGAG CCAGCGCGGG
GTAAAAATCA CGCTGGATTT ACCTTCGGGC GACAGTCTAT CAGAAGGTCG CACGCCGCTG
ATGTATCAGG GGCTGGAAGT CGGCACGCTG AATAAAATCA CGTTGAATCC AGACGACAGC
AAGGTCAGCG GAGAGCTGAT CATCGATCCT TCCGTGGTTT CGCTGATGCG GGAAGGCACG
CGTATCGAAC TCAGCAAACC CCAGCTTTCG CTCAGCGATC TGAATGTTTC ACGCCTGTTG
AGCGGCCCAA CGCTAACGCT CATCCCCGGT GAAGGCGAAC CGCGCCAGCA TTTTACCGTC
CTGGATAGCG GACAACAGCA ACTCACCCAA CCCGGCGCGC TATCTATTCA ACTTACGGCG
GCACAAAGCT ATGGCATTGA TAGCGGTCAA CCCGTATTGC TGCACGGCGT GCAGATCGGT
CAGGTCGTGA AACGCACGTT GGATGAACAA GGCGTCAGCT TCATTTTGGT GATCGAGCCG
CGATATCGCC AGTTATTGCA CCGCGACAGC AAATTCATCG TTAACAGCCG CATAAATGTG
AAGATGGGGC TGGATGGGAT TCAAGTGCTG GGTGCCAGCG CACAAGAGTG GGTCAACGGC
GGCATTCAGG TTTTACCGGG CAGCAAAGGC GACGTGCAGG CGCGTTACCC GCTGTTCAGC
GATCTCGAAA AAGCCGAAGA AGGTATTCGC GGTTCCACCC CCTCGCCCAC CCTCACCTTA
GTGACCGATA GCTTGCCAGA TATTCAGGAC GGTTCCATCG TGCTGTACCG TAAATTCCAG
GTAGGCGAAA TCATGCGGGT GCGACCGAAA GCCGAAACCT TTGAGGTTGA CGTTTATATT
CGTCCCGAAC ACCGCAAGCT ACTGACGGAA AACAGCGTGT TCTGGGCAGA AGGCGGAGCC
CGTGTGCAGT TGAATACCTC GGGTCTGACC GTGCAAGCTT CCCCGCTGAA TCGGGCGCTT
AAGGGGGCTA TCAGTTTTGA TAATCTGGAA GGCGCCCCAG AAATTAAAGG CGGCAAACGT
GTCCTGTACA ACAACGAAAC GGCGGCGCGC GCCGTGGGGA GCCGCATCAT TCTGCGCACC
TACGACGCCA GTAAACTCGC GCCGGGTATG CCGATCCGCT ATCTGGGCAT TGATATCGGT
CAGTTGGATT CGCTGAAACT GTCCGAACAA CGCAACGAAG TGCTGGTGCA GGCCGTGCTC
TATCCTGAGT ATGTGCGTAA TTTCGCCCGT GCCGGAACGC GTTTTTCCGT CGTCACGCCG
GAAATCTCCG CGGCTGGTGT AAACCACCTG GAAACGCTAT TCCAGCCCTA TATCAACGTC
GAGCCGGGCA ACGGCAGCGT CACGCGCAAT TTTGAGCTGC AACAGGCCAC CATCTCCGAT
TCTCGCTATC AGGACGGCCT GAATATCAGC GTTGATGCAC CGGAAGCAGG CGCGTTGCAG
GTCGGCACAC CGGTGCTGTT CCGCGGCATT GAAGTCGGTA CGGTAACCGG GCTGTCACTG
GGTACGCTCT CTGACCGTAT CGCCGTGTCG CTACGCATCA GCAAACGCTA TCAGCATCTG
GTGCGTGATA ATTCCGTCTT CTGGCAAGCT TCGGGTTACA ATCTGGAATT CGGATTGGTT
GGCGGCGTCA TCAAGAGCGG AACCTTCCAG CAGTTTATTC GCGGCGGTAT CGCTTTCGCC
ACGCCGCCTA GCACACCACT CGCGCCTAAG GCGCAGGAAG GGAAACATTT CCTGCTACGA
AACGAGGAAC CTAAAGAGTG GCGGCAATGG GGTACGGCGA TTCCAAATCC CCCCAATAAT
TAA
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| Protein sequence | MQDNTSGTPT EATVKNKRRL SPFWLLPLIA LMIAGWLIYT NQQERGATVT IDFVSADGIV
AGRTPVRYQG VEVGTVQNIK LSEDLRTIQV EASIKSDMKE ALRSGTQFWL VTPKASLAGV
SGLDALVGGN YIGMMPGSGE AQEHFSALDT QPKYRVNTGE LMIHLHADDL GSLNTGSLVY
YRKIPVGKVY DYTVSQDRRG VMIDVLVERR FTHLVKKNSR FWNVSGFNAD ISVSGAKIEM
ENLAALVNGA IAFDSPEESE DASAEQSYRL YPDLAQSQRG VKITLDLPSG DSLSEGRTPL
MYQGLEVGTL NKITLNPDDS KVSGELIIDP SVVSLMREGT RIELSKPQLS LSDLNVSRLL
SGPTLTLIPG EGEPRQHFTV LDSGQQQLTQ PGALSIQLTA AQSYGIDSGQ PVLLHGVQIG
QVVKRTLDEQ GVSFILVIEP RYRQLLHRDS KFIVNSRINV KMGLDGIQVL GASAQEWVNG
GIQVLPGSKG DVQARYPLFS DLEKAEEGIR GSTPSPTLTL VTDSLPDIQD GSIVLYRKFQ
VGEIMRVRPK AETFEVDVYI RPEHRKLLTE NSVFWAEGGA RVQLNTSGLT VQASPLNRAL
KGAISFDNLE GAPEIKGGKR VLYNNETAAR AVGSRIILRT YDASKLAPGM PIRYLGIDIG
QLDSLKLSEQ RNEVLVQAVL YPEYVRNFAR AGTRFSVVTP EISAAGVNHL ETLFQPYINV
EPGNGSVTRN FELQQATISD SRYQDGLNIS VDAPEAGALQ VGTPVLFRGI EVGTVTGLSL
GTLSDRIAVS LRISKRYQHL VRDNSVFWQA SGYNLEFGLV GGVIKSGTFQ QFIRGGIAFA
TPPSTPLAPK AQEGKHFLLR NEEPKEWRQW GTAIPNPPNN
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