Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1846 |
Symbol | |
ID | 8132789 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 2131215 |
End bp | 2131910 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644865135 |
Product | Extensin family protein |
Protein accession | YP_003017423 |
Protein GI | 253688233 |
COG category | [S] Function unknown |
COG ID | [COG3921] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGGGGAT GGTTGATATT TGTGGTAATT CTGGGGGCGT TAGTGGCTTT GGCTCCTTGG CTCCAACGTC AACTCCCACC CGGTTACGAT CCCTTCTCTC CACTGTCTGT CGATGATCCG CCCACGTTTA TCACCCGGCT GAAAATGAAA TCGGTCGCCA GCGATCCTGA AGCCTGTTTG GCGGTGTTAA AGCAGGCACA GGAAAGTGGG CGACTCCGCT TCTCTGAGGC TAATGATGTC AGTGGACAAT GTCCGGTGGT GTCGCCTGTT CGGTTACAAA GTTTTGGTGC AGTCGCACTG AGTTCCAGTT TCCTTGCGAG TTGCCCGCTG GCGCTGAGTA GTACCATGTT TGTGGCGCAG GTTGCGGGGC CGCAGGCACA ATCACTCGGT TCATCGCTGG CGCGTATCGA CCATATGGGC AGCTACGCCT GTCGCAATGT CTATCATCGG CCGGAAGGAC GCTTGAGTGA GCACGCGACG GCAGACGCGT GGGATATCGC GGCGTTCCGT CTCTCTGATG GACGGCAGGT GAGCGTCCTG AATCAGTGGT CGGCAACGGA CGAACGTGGC AGCTATTTGC GCACCACGTT CAGGGAAAGC TGTCGCTTTT TCGGTAATTC GCTGGGGCCG GAATACAACG CCGCACATGC TAATCACTTT CATTTTGGTA TGCGCGGTTT TGGCGTGTGT CGATGA
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Protein sequence | MRGWLIFVVI LGALVALAPW LQRQLPPGYD PFSPLSVDDP PTFITRLKMK SVASDPEACL AVLKQAQESG RLRFSEANDV SGQCPVVSPV RLQSFGAVAL SSSFLASCPL ALSSTMFVAQ VAGPQAQSLG SSLARIDHMG SYACRNVYHR PEGRLSEHAT ADAWDIAAFR LSDGRQVSVL NQWSATDERG SYLRTTFRES CRFFGNSLGP EYNAAHANHF HFGMRGFGVC R
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