Gene PC1_1846 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1846 
Symbol 
ID8132789 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp2131215 
End bp2131910 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content56% 
IMG OID644865135 
ProductExtensin family protein 
Protein accessionYP_003017423 
Protein GI253688233 
COG category[S] Function unknown 
COG ID[COG3921] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGGGAT GGTTGATATT TGTGGTAATT CTGGGGGCGT TAGTGGCTTT GGCTCCTTGG 
CTCCAACGTC AACTCCCACC CGGTTACGAT CCCTTCTCTC CACTGTCTGT CGATGATCCG
CCCACGTTTA TCACCCGGCT GAAAATGAAA TCGGTCGCCA GCGATCCTGA AGCCTGTTTG
GCGGTGTTAA AGCAGGCACA GGAAAGTGGG CGACTCCGCT TCTCTGAGGC TAATGATGTC
AGTGGACAAT GTCCGGTGGT GTCGCCTGTT CGGTTACAAA GTTTTGGTGC AGTCGCACTG
AGTTCCAGTT TCCTTGCGAG TTGCCCGCTG GCGCTGAGTA GTACCATGTT TGTGGCGCAG
GTTGCGGGGC CGCAGGCACA ATCACTCGGT TCATCGCTGG CGCGTATCGA CCATATGGGC
AGCTACGCCT GTCGCAATGT CTATCATCGG CCGGAAGGAC GCTTGAGTGA GCACGCGACG
GCAGACGCGT GGGATATCGC GGCGTTCCGT CTCTCTGATG GACGGCAGGT GAGCGTCCTG
AATCAGTGGT CGGCAACGGA CGAACGTGGC AGCTATTTGC GCACCACGTT CAGGGAAAGC
TGTCGCTTTT TCGGTAATTC GCTGGGGCCG GAATACAACG CCGCACATGC TAATCACTTT
CATTTTGGTA TGCGCGGTTT TGGCGTGTGT CGATGA
 
Protein sequence
MRGWLIFVVI LGALVALAPW LQRQLPPGYD PFSPLSVDDP PTFITRLKMK SVASDPEACL 
AVLKQAQESG RLRFSEANDV SGQCPVVSPV RLQSFGAVAL SSSFLASCPL ALSSTMFVAQ
VAGPQAQSLG SSLARIDHMG SYACRNVYHR PEGRLSEHAT ADAWDIAAFR LSDGRQVSVL
NQWSATDERG SYLRTTFRES CRFFGNSLGP EYNAAHANHF HFGMRGFGVC R