Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1832 |
Symbol | |
ID | 8132775 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 2119145 |
End bp | 2120620 |
Gene Length | 1476 bp |
Protein Length | 491 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644865121 |
Product | glucose-6-phosphate 1-dehydrogenase |
Protein accession | YP_003017409 |
Protein GI | 253688219 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0364] Glucose-6-phosphate 1-dehydrogenase |
TIGRFAM ID | [TIGR00871] glucose-6-phosphate 1-dehydrogenase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.581606 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCGGTAA CTTCAACAGC CCAAGCGTGC GATCTGGTTA TTTTCGGTGC CAAGGGCGAT CTGGCGCGCC GTAAATTGCT GCCTTCCCTG TACCAGTTGG AAAAAGCAGG CCACATCCAT GCGGACACCA AAATTATCGG GGTGGGCCGT GCTGATTGGG ATAAAGCGGA GTATACCCGC GTCGTGCGCG AAGCGCTTGA CACCTTTATG AAAGAAGCCA TCGACGACAA GTTGTGGGAA ACGCTAAGCA GTCGGCTGGA TTTCTGCAAT CTTGATGTGG AAGACACGAA AGCGTTCAAC AAGCTGGGCA AGATGCTTGA CCAGAAAAAT CGCACCACAA TCAACTATTT TGCGATGCCG CCGAGCACAT TCGGGGCGAT CTGCAAAGGG CTGGGAACCG CAGGGCTGAA TAAAGAGCCG GCGCGCGTGG TGATGGAAAA ACCGCTGGGA ACCGATCTGG CGTCTTCTCG CGTCATTAAC GATCAGGTTG CGGAATACTT CAACGAATGT CAGGTTTACC GCATCGACCA CTATCTGGGT AAAGAGACCG TTCTGAACCT GCTGGCGCTG CGTTTTGCCA ACTCGCTGTT CTCCTCAAAC TGGGACAACC GGACGATCGA CCATGTGCAG ATCACGGTGG CCGAAGAAGT CGGGATTGAA GGGCGCTGGG GCTATTTTGA TAAAGCTGGC CAGATGCGCG ATATGATCCA GAACCACCTG TTACAGATTC TGACGATGAT TGCGATGTCG CCGCCGTCCG ATCTGACGAC CGACCGTATT CGTGATGAAA AAGTGAAGGT GCTGCGTTCA CTGCGTCGTA TCGACCGCTC CAACGTGCAT GAAACGACCG TACGCGGCCA ATATACCTCT GGTTTTGTTC AGGGACATAA AGTGCCGGGT TACCTGGAAG AAGAAGGCGC GAACAAAAGC AGCAGCACGG AAACCTTTGT CGCAATTCGT GTAGATATCG ATGATTGGCG CTGGTCTGGT GTGCCGTTCT ACCTGCGTAC CGGTAAACGC TTGCCGACCA AATGTTCGGA AGTGGTGGTG TACTTTAAGA ATCCTGCGCT GAACCTATTC CATGATTCTT ACCAACAGTT GCCGCAGAAC AAACTGATCA TTCGTTTGCA GCCGGATGAA GGTGTGGAAA TCCAGATTCT GAATAAAATT CCAGGATTAG AACACAAGCA CCGCCTGCAA ACGGTGAAGC TGGACCTGAG CTTCTCGGAA ACCTTTAATC AGCAACATTT GGCCGATGCC TATGAGCGTC TGCTGCTGGA AACCATGCGC GGAATTCAGG CGCTGTTCGT TCGTCGTGAT GAGGTTGAAG AGGCCTGGAA ATGGGTGGAT TCCATCATGG ATGCGTGGGG AATGGACAAT GATGCGCCGA AACCGTATCA GGCTGGAAGC TGGGGGCCGG TGGCATCTGT AGCAATGATT ACCCGAGATG GCCGTTCCTG GAATGAGTTT GAGTAA
|
Protein sequence | MAVTSTAQAC DLVIFGAKGD LARRKLLPSL YQLEKAGHIH ADTKIIGVGR ADWDKAEYTR VVREALDTFM KEAIDDKLWE TLSSRLDFCN LDVEDTKAFN KLGKMLDQKN RTTINYFAMP PSTFGAICKG LGTAGLNKEP ARVVMEKPLG TDLASSRVIN DQVAEYFNEC QVYRIDHYLG KETVLNLLAL RFANSLFSSN WDNRTIDHVQ ITVAEEVGIE GRWGYFDKAG QMRDMIQNHL LQILTMIAMS PPSDLTTDRI RDEKVKVLRS LRRIDRSNVH ETTVRGQYTS GFVQGHKVPG YLEEEGANKS SSTETFVAIR VDIDDWRWSG VPFYLRTGKR LPTKCSEVVV YFKNPALNLF HDSYQQLPQN KLIIRLQPDE GVEIQILNKI PGLEHKHRLQ TVKLDLSFSE TFNQQHLADA YERLLLETMR GIQALFVRRD EVEEAWKWVD SIMDAWGMDN DAPKPYQAGS WGPVASVAMI TRDGRSWNEF E
|
| |