Gene PC1_1819 details

Gene Information

• Locus tag: PC1_1819
• Symbol: ruvA
• ID: 8132762
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium carotovorum subsp. carotovorum PC1
• Kingdom: Bacteria
• Replicon accession: NC_012917
• Strand: +
• Start bp: 2104157
• End bp: 2104774
• Gene Length: 618 bp
• Protein Length: 205 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 644865108
• Product: Holliday junction DNA helicase RuvA
• Protein accession: YP_003017396
• Protein GI: 253688206
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0632] Holliday junction resolvasome, DNA-binding subunit
• TIGRFAM ID: [TIGR00084] Holliday junction DNA helicase, RuvA subunit

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.180722
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGATAGGTC GTCTCAGAGG CATTATCCTG GAAAAACAGC CGCCGCAGGT GCTGATAGAA 
GCTAACGGCG TGGGTTACGA AGTCCATATG CCGATGACGT GCTTTTACGA ACTCCCTGAG 
CTCAATCAGG AAGCGATTAT CTTTACCCAT TTCGTGGTCC GCGAAGATGC ACAACTGCTG 
TTCGGTTTTA ATGATAAGCA GGAGAGGGCG CTGTTCCGCG AGCTGATCAA AGTGAATGGC 
GTTGGGCCGA AGCTGGCGCT GGCGATTCTA TCCGGGATGT CCGCGACGCA GTTTGTCAGC 
GCGGTTGAGC GCGAAGAAAT CGGTGCGTTG ATTAAACTTC CGGGCGTAGG TAAGAAAACG 
GCGGAAAGGC TGGTTGTTGA AATGAAAGAT CGCTTCAAGG GCTTGAGCGG CGATCTGTTT 
AATCCGGTCA GCGATATTCC GCTGGCATCG CCGGCTAGCG CAGAAAGCCG TGCCAGCGAT 
CCTGAAGCGG AAGCCGCAGC AGCACTGGTT GCGCTGGGCT ATAAACCGCA GGAAGCTAGC 
CGCATGATTT CCAAGATTGC GCGCCCTGAG GCCGACTGTG AAACCCTGAT CAGGGATGCA 
CTGCGCGCGG CGCTGTGA 

 

Protein sequence

MIGRLRGIIL EKQPPQVLIE ANGVGYEVHM PMTCFYELPE LNQEAIIFTH FVVREDAQLL 
FGFNDKQERA LFRELIKVNG VGPKLALAIL SGMSATQFVS AVEREEIGAL IKLPGVGKKT 
AERLVVEMKD RFKGLSGDLF NPVSDIPLAS PASAESRASD PEAEAAAALV ALGYKPQEAS 
RMISKIARPE ADCETLIRDA LRAAL