Gene PC1_1818 details

Gene Information

• Locus tag: PC1_1818
• Symbol: ruvC
• ID: 8132761
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium carotovorum subsp. carotovorum PC1
• Kingdom: Bacteria
• Replicon accession: NC_012917
• Strand: +
• Start bp: 2103544
• End bp: 2104065
• Gene Length: 522 bp
• Protein Length: 173 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 644865107
• Product: Holliday junction resolvase
• Protein accession: YP_003017395
• Protein GI: 253688205
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0817] Holliday junction resolvasome, endonuclease subunit
• TIGRFAM ID: [TIGR00228] crossover junction endodeoxyribonuclease RuvC

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.311556
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAATAA TAGTTGGCAT TGACCCCGGT TCTCGCGTGA CGGGCTATGG CATTATCCGT 
CAGCAGGGGC GTCACCTGAC GTATCTCGGC AGCGGCTGCA TCCGTACCGT GGTGGATGAT 
ATGCCCACGC GGTTGAAGCT GATTTACGCT GGCGTCAGTG AAATCATTAC GCAATTTCGC 
CCAGATTGTA TGGCGATTGA GCAGGTTTTC ATGGCGAAAA ACCCGGATTC AGCCTTGAAG 
CTGGGGCAGG CGCGCGGTGT AGCTATCGTC GCGGGAGTCA ATCAGGACCT ACCCGTGTTT 
GAGTATGCGG CGCGTTTGGT TAAACAAACG GTGGTGGGAA CGGGCGCGGC GGATAAAAAG 
CAGGTACAGC ATATGGTCCG CTCGCTGCTG AAATTGTCGG CCAGCCCGCA GGCGGACGCC 
GCCGATGCGT TGGCGATTGC CATCACTCAC TGCCATTTTA ACCAAAGCCT GCTGCGTACA 
TCGGCGGCGA AAGTGAACCC GCTGGCAGGA CGACTGCGCT GA 

 

Protein sequence

MTIIVGIDPG SRVTGYGIIR QQGRHLTYLG SGCIRTVVDD MPTRLKLIYA GVSEIITQFR 
PDCMAIEQVF MAKNPDSALK LGQARGVAIV AGVNQDLPVF EYAARLVKQT VVGTGAADKK 
QVQHMVRSLL KLSASPQADA ADALAIAITH CHFNQSLLRT SAAKVNPLAG RLR