| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1806 |
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| Symbol | |
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| ID | 8132749 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 2089400 |
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| End bp | 2090935 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644865095 |
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| Product | integral membrane protein MviN |
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| Protein accession | YP_003017383 |
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| Protein GI | 253688193 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0728] Uncharacterized membrane protein, putative virulence factor |
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| TIGRFAM ID | [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes)
[TIGR01695] integral membrane protein MviN |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0960933 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTTAC TTAAATCACT GGCTGCCGTC AGTTCCATGA CCATGCTATC GCGCGTCTTA
GGGTTCGTGC GCGATGCGAT TGTCGCTCGT ATTTTTGGTG CCGGCATGGC GACGGATGCT
TTCTTTGTGG CGTTTAAACT GCCTAACCTG CTCCGCCGTA TTTTCGCGGA AGGCGCATTC
TCACAGGCGT TTGTGCCTAT TCTTGCTGAA TATAAAAGCC AGCAGGGTGA AGAGGCCACG
CGAACGTTCC TCGCTTATGT TTCCGGTATG CTGACGCTGA TTCTGGCGTT GGTCACCGTT
GCGGGAATGG TTGCCGCGCC CTGGGTTATT ATGGTGACCG CTCCCGGTTT TGCCGCGACG
CCAGAGCGCT TCGAACTTAC CTCGGATCTG TTAAGAGTCA CGTTCCCCTA CATCCTGCTG
ATTTCGCTGA CCTCTATGGT GGGGTCGGTG CTCAACACCT GGAACCGTTT CTCGGTGCCG
GCGTTTGCCC CGACATTGCT TAACGTCAGT ATGATTGGCT TCTCGCTGTT TGCCGCGCCG
TATTTTAACC CGCCGGTAAT GGCGTTGGCC TGGGCGGTGT TGGTTGGCGG TTTACTGCAA
CTCGGCTACC AGTTACCGCA TCTGAAAAAG ATTGGCATGC TAGTATTGCC GCGCCTGAAA
TGGCGGGAAC CGAGCGTCTG GCGAGTCATG AAACTGATGG GGCCTGCGGT TTTGGGTGTC
TCGGTAAGCC AGATTTCACT CATTATCAAC ACCATTTTCG CGTCCTTCCT CAGCGAAGGG
GCGGTGTCAT GGATGTATTA CGCCGATCGA CTGATGGAGT TTCCTTCCGG TGTTCTGGGC
GTGGCGTTGG GAACGATCTT ACTCCCGTCG CTGGCGAAGA GTTTTGCCAG TGGCAATCAT
GACGAATACT CCCGTCTGAT GGATTGGGGG CTCCGCCTGT GTTTCCTGCT GGCGCTGCCG
AGTGCGGTTG CATTGGGTAT TTTGGCTCAA CCGTTAACGG TGTCTTTGTT CCAGTACGGC
AAATTTAGCG CCTTTGATGC GCTGATGACT CAGCGGGCGC TGATAGCTTA CTCGGTTGGG
CTGATGGGAT TGATTGTCGT TAAAGTGTTA GTACCTGGCT TTTATTCCCG ACAGGATATA
AAGACGCCGG TCAAAATCGC GATAGTCACG CTGATTCTGA CGCAGGTCAT GAACCTGATC
TTTATTGGTC CGCTGCAACA TGCGGGTCTG GCGTTGTCCA TCGGTCTGGC CTCCTGCCTG
AATGCCGGGC TGTTGTACTG GCAACTGCGT AAGCAGGATA TTTTCCAGCC ACAGCCGGGC
TGGAAAGGTT TTCTGGTGCG TCTGCTGGTT GCGGTGATCG TGATGTCGCT GGTTTTGCTG
GGGATGCTGT GGTGGATGCC CGCGTGGGAT GACGGCAATA TGACGATGCG AATTCTGCGT
TTGCTGCTGG TTGTGGTCGC CGGGGCGGGC TCTTATTTTG CCACGCTGGC GCTGTTGGGA
TTCCGCCCTC GGGATTTCGC CCGCCGTAGC GTGTAA
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| Protein sequence | MNLLKSLAAV SSMTMLSRVL GFVRDAIVAR IFGAGMATDA FFVAFKLPNL LRRIFAEGAF
SQAFVPILAE YKSQQGEEAT RTFLAYVSGM LTLILALVTV AGMVAAPWVI MVTAPGFAAT
PERFELTSDL LRVTFPYILL ISLTSMVGSV LNTWNRFSVP AFAPTLLNVS MIGFSLFAAP
YFNPPVMALA WAVLVGGLLQ LGYQLPHLKK IGMLVLPRLK WREPSVWRVM KLMGPAVLGV
SVSQISLIIN TIFASFLSEG AVSWMYYADR LMEFPSGVLG VALGTILLPS LAKSFASGNH
DEYSRLMDWG LRLCFLLALP SAVALGILAQ PLTVSLFQYG KFSAFDALMT QRALIAYSVG
LMGLIVVKVL VPGFYSRQDI KTPVKIAIVT LILTQVMNLI FIGPLQHAGL ALSIGLASCL
NAGLLYWQLR KQDIFQPQPG WKGFLVRLLV AVIVMSLVLL GMLWWMPAWD DGNMTMRILR
LLLVVVAGAG SYFATLALLG FRPRDFARRS V
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