Gene PC1_1804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1804 
Symbol 
ID8132747 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp2087643 
End bp2088278 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content54% 
IMG OID644865093 
Producthypothetical protein 
Protein accessionYP_003017381 
Protein GI253688191 
COG category[S] Function unknown 
COG ID[COG3132] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.817852 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATACC AACTAGATAC TCGTGAAGCT CGCGTGATTG GCTGCATGTT GGAAAAGCAG 
ATCACGACCC CGGATCAATA CCCGATGTCG TTAAACGGCA TCACCACGGC CTGTAATCAG 
AAAACTAACC GTGAACCCGT GATGGAACTG AGTGAAAGCG AAGTGCAGCA AACGCTGGAT 
TTACTCGTGA AGAAGCATTT TCTGCGCACG CTTAGCGGTT TTGGCAATCG TGTCGTGAAG 
TATGAACATC GTTTTTGCAA CTCTGAATTT GGCGACCTGA AACTCTCACC GGCGGAAGTC 
GCACTGGTGA CGACGCTTCT CCTGCGTGGG CCACAGACGC CAGGTGAACT GCGCACTCGC 
GCGGCCCGGC TGTATGAGTT TTCAGATGTT AGCGAGGCGG AATCCACGCT TGAACAGTTG 
CAACAACGCG ATGATGGCCC GTTTGTCGTT CGGCTGGCGC GGGAAGCGGG TAAGCGGGAA 
AGTCGTTATC GGCACCTTTT CAGCGGCGAC GCCAGTGATG CTGCTCCTGA AGAAGAAGGG 
GCGGGCGACA ATTCACATCA GTTGACTGAG CGGGTTGAGA CGTTAGAAAA AGAGGTCGCG 
GAACTCAAAC GTCAGCTTGC CGCGCTGTTA GCGTAA
 
Protein sequence
MKYQLDTREA RVIGCMLEKQ ITTPDQYPMS LNGITTACNQ KTNREPVMEL SESEVQQTLD 
LLVKKHFLRT LSGFGNRVVK YEHRFCNSEF GDLKLSPAEV ALVTTLLLRG PQTPGELRTR 
AARLYEFSDV SEAESTLEQL QQRDDGPFVV RLAREAGKRE SRYRHLFSGD ASDAAPEEEG 
AGDNSHQLTE RVETLEKEVA ELKRQLAALL A