Gene PC1_1795 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1795 
Symbol 
ID8132737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp2078773 
End bp2079339 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content54% 
IMG OID644865083 
Producthypothetical protein 
Protein accessionYP_003017372 
Protein GI253688182 
COG category[S] Function unknown 
COG ID[COG3009] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.309895 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAAAG CATGGACACT GGTTCTGGCG CTGGTATTGA GCGCGTGCAG CAGTAGCAGT 
ACGCAGAAAA CGTATTATCA ACTGCCGATC ATCGCGGATA CCAACACAGT GCAGGCTGCG
GTGACTCAGG GTCACCCGCT TTGGGTTGAA CATGTCAGCG TGGCGGACTA TCTCGTCAAT
GCGGGATTGG TCTACCAGAC TAACGATGTG CAGTATGTCA TTGCCAGTAA TAACCTGTGG
GCCAGCCCTC TGGATCAGCA ATTGCAGCAG GCGCTGGTGA CTAATCTAGG GCATAAATTG
CCTGGTTGGG TTGTGACCAC ACAGCCGCAA GGAAGCGATC AGGCGGTGTT GAACGTGTCG
GTTACGGGTT TTCACGGCCG CTATGATGGC AATGCTGTCG TGCGCGGAGA GTGGATGCTG
ACCTATCAGG GAAAAGTAGT TAAACGCTCC TTCAGCGTAG TACTACCACA AACGGAAGAT
GGCTATGACG CACTGGTCAG AACGTTGGCA CAAGGCTGGC AGCAGGTTTC CCAGTCGATT
GCCCAGCAGG CCGTGACGCT GAACTAA
 
Protein sequence
MMKAWTLVLA LVLSACSSSS TQKTYYQLPI IADTNTVQAA VTQGHPLWVE HVSVADYLVN 
AGLVYQTNDV QYVIASNNLW ASPLDQQLQQ ALVTNLGHKL PGWVVTTQPQ GSDQAVLNVS
VTGFHGRYDG NAVVRGEWML TYQGKVVKRS FSVVLPQTED GYDALVRTLA QGWQQVSQSI
AQQAVTLN