Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1795 |
Symbol | |
ID | 8132737 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 2078773 |
End bp | 2079339 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644865083 |
Product | hypothetical protein |
Protein accession | YP_003017372 |
Protein GI | 253688182 |
COG category | [S] Function unknown |
COG ID | [COG3009] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.309895 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGAAAG CATGGACACT GGTTCTGGCG CTGGTATTGA GCGCGTGCAG CAGTAGCAGT ACGCAGAAAA CGTATTATCA ACTGCCGATC ATCGCGGATA CCAACACAGT GCAGGCTGCG GTGACTCAGG GTCACCCGCT TTGGGTTGAA CATGTCAGCG TGGCGGACTA TCTCGTCAAT GCGGGATTGG TCTACCAGAC TAACGATGTG CAGTATGTCA TTGCCAGTAA TAACCTGTGG GCCAGCCCTC TGGATCAGCA ATTGCAGCAG GCGCTGGTGA CTAATCTAGG GCATAAATTG CCTGGTTGGG TTGTGACCAC ACAGCCGCAA GGAAGCGATC AGGCGGTGTT GAACGTGTCG GTTACGGGTT TTCACGGCCG CTATGATGGC AATGCTGTCG TGCGCGGAGA GTGGATGCTG ACCTATCAGG GAAAAGTAGT TAAACGCTCC TTCAGCGTAG TACTACCACA AACGGAAGAT GGCTATGACG CACTGGTCAG AACGTTGGCA CAAGGCTGGC AGCAGGTTTC CCAGTCGATT GCCCAGCAGG CCGTGACGCT GAACTAA
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Protein sequence | MMKAWTLVLA LVLSACSSSS TQKTYYQLPI IADTNTVQAA VTQGHPLWVE HVSVADYLVN AGLVYQTNDV QYVIASNNLW ASPLDQQLQQ ALVTNLGHKL PGWVVTTQPQ GSDQAVLNVS VTGFHGRYDG NAVVRGEWML TYQGKVVKRS FSVVLPQTED GYDALVRTLA QGWQQVSQSI AQQAVTLN
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