| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1793 |
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| Symbol | |
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| ID | 8132735 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 2075770 |
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| End bp | 2077146 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644865081 |
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| Product | integral membrane protein, PqiA family |
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| Protein accession | YP_003017370 |
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| Protein GI | 253688180 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2995] Uncharacterized paraquat-inducible protein A |
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| TIGRFAM ID | [TIGR00155] integral membrane protein, PqiA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTGTTCCC ATCACGATCG ACATGACCCT GATCTTCAAC AAAAACAGAG TCATCAACAC
AAGCACGATC TTCAACATGA ACCTGTTCAT GGGCATAGCC CTGAACACGA ACATCATCAC
CATGATGATT ATATGCTTTG CCCGCAGTGT GACCTGCTGG TGGAGCTACC TGAACTCTTG
CACGGCCAGA AGGCGACCTG CCCGCGTTGC AAAACGGGAC TAACCAGTCG ACAGACGGAA
CCGCGTAAAC GGCCGGTTGG CTATGCGGTG AGTGCGCTAT TCATGCTATT GCTGGCAAAC
CTCTTCCCCT TCGTTTCTAT GCGTGTGGCG GGAATCACCA GCGAAATAAC CCTGATACAA
ATTCCTAAAG TGATGGTGGC GGAAGACTAT GCCAGCGTCG CGACGCTGTT TATGCTTTTT
GTTCAGCTGG TTCCGGCCTT AAGTATGCTG ACCCTCATTC TGCTTTGCCT GCATGCCTCG
TTACCGCTGG CGTTGAAAAA AAGCATGGGT AAGATGCTGT TTCATCTCAA AAGCTGGGGA
ATGGCGGAGA TTTTTCTGGC TGGCGTGCTG GTCAGTTTTG TCAAACTGAT GGCCTATGGC
GATATCGGTA TTGGTACCAG TTTTGTGCCT TTTGTCCTGT TCTGTCTGTT GCAACTGCTG
GCTTTCCAAA GCCTCGACCG CCGCTGGCTG TGGAATGATA TCGTGCCGCC CCCGGCATTA
CCTGCGCCCC CGGTTCTGGG TAAAAGCGGG CTATCGCAAG GGCTGCGTTC GTGCTCATGT
TGTACCGCTA TTCTGCCAGC CAGTCAGTTA ATCTGCCCAC GCTGCCACTC ACGCGGACAT
GCTCGCAAGA AGCATAGCCT GCAATGGACG CTGGCTCTGC TGATTACCTC GGTGATGCTT
TATATCCCCT CGAATCTGCT GCCGATCATG GTGACCGAAG CCTTCGGCGA TCGCATGGGA
TCGACGATCA TGTCGGGTGT TATTCTGCTG TGGGGAATGG GATCTTATCC TGTTGCGATG
GTTATTTTTG TCGCCAGCGT CATGGTGCCA TCGCTAAAAA TGTTGGCCTT AGGCTGGCTT
TGTTGGCAGG CGAATGGCAA AACCAAAAAA ACGGAAGACA GCGAGCGGAT GCATGTCATC
TATGAGATGG TTGAGTTTGT TGGACGCTGG TCGATGATTG ATGTGTTCGT GATCGCCGTC
CTGTCTGCGA TGGTGCGCAT CGGTCGCCTG ATGAGTATTT ATCCCGCCGT TGGGGCGGTG
CTGTTCGCGG CCGTGGTGAT TTTGACCATG TTTGCCGCGA TGATGTTTGA TCCCCGTTTG
TTGTGGGATC GTCGCAATGA TGTTCTTCAT AAGGAGCCTG CCGTTGGCGA AAGATAA
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| Protein sequence | MCSHHDRHDP DLQQKQSHQH KHDLQHEPVH GHSPEHEHHH HDDYMLCPQC DLLVELPELL
HGQKATCPRC KTGLTSRQTE PRKRPVGYAV SALFMLLLAN LFPFVSMRVA GITSEITLIQ
IPKVMVAEDY ASVATLFMLF VQLVPALSML TLILLCLHAS LPLALKKSMG KMLFHLKSWG
MAEIFLAGVL VSFVKLMAYG DIGIGTSFVP FVLFCLLQLL AFQSLDRRWL WNDIVPPPAL
PAPPVLGKSG LSQGLRSCSC CTAILPASQL ICPRCHSRGH ARKKHSLQWT LALLITSVML
YIPSNLLPIM VTEAFGDRMG STIMSGVILL WGMGSYPVAM VIFVASVMVP SLKMLALGWL
CWQANGKTKK TEDSERMHVI YEMVEFVGRW SMIDVFVIAV LSAMVRIGRL MSIYPAVGAV
LFAAVVILTM FAAMMFDPRL LWDRRNDVLH KEPAVGER
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