Gene PC1_1790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1790 
Symbol 
ID8132732 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp2070413 
End bp2071516 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content53% 
IMG OID644865078 
ProductMOSC domain containing protein 
Protein accessionYP_003017367 
Protein GI253688177 
COG category[R] General function prediction only 
COG ID[COG3217] Uncharacterized Fe-S protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.606088 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATTGGCG TAACGCGGCT TTATATTCAT CCGGTAAAAT CGATGCGGGG GCTACAGCTG 
TCCCACGCGA TGGCGTCTGT CAGCGGTTTG GCGAACGATC GTGCCCTCAT GATTACCGAA
CTTGATGGAA CATTTATTAC CGCTCGCCAG TATCCACAAA TGGTGCTGTT TACACCTGCG
TTGCTGCCGG ACGGGCTGTT TATTGCTGCA CCTGATGGTC AAACTGCCAC GATACGCTTT
GCCGATTTCA CCGCAGCACC TCAGCCGACG GAAGTCTGGG GCACGCACTT TACGGCGCTC
GTCGCCCCCG ATGCCATCAA CACATGGCTA AGCCACTATT TTCAGCGCGC CGTCCAGCTT
CGCTGGGTGG GCAATGAACC GTCGCGGCGG GTTAAGCATT ATCCAGACGT TCCCCTGTCA
TTTGCTGACG GCTATCCGTT TTTGTTAATC AATGACGCGT CATTTCAGGC ACTGCGTCAG
CGCTGTTCCG CCGGCATTAA GATCGAACAA TTTCGCCCCA ATCTGGTGGT GACGGGTGCG
GACGCTTTTG CCGAAGACAG TTGGAAGACC ATTCGTATTG GCGAGATTAT TTTTGACGTC
GTCAAACCTT GTAGCCGCTG CATTTTCACC ACCGTCAGCA TCGAACGTGG CCGTAAACAT
CCGTCCGCAG AACCGCTGGC AACGCTGCAA TCGTTTCGCA CGGCCGAAAA CGGTGACGTT
GATTTCGGGC AAAATCTGGT CGCCAGAAAT ACGGGCATTA TTCGCGTAGG CGATACGCTA
GAAGTCCTGG CAACCAAGCC GCCGCGCCCT TACGGTTCGG GTCAGGTAGT CGAGAGCCTT
GTCGTTTCCG AGAAAAGCGA ACAGGCCGTC ACCATTCACT ATCAGGGAAA ATCGTTGCAA
GGGAATAATC AGCAGATTTT ACTGGAACAG TTGGAGCAAC AGGGCATTCG AGTCCCCTAC
TCTTGTCGGG CAGGACTGTG CGGTTGCTGT AAATTGACGT TAGTCAGCGG AGAAGTTTCT
GCTCTGAAGC AAAGCGCTAT CAGAGGAAAC GGCGAGATTC TTAGCTGTAG CTGTATTCCA
CAGAGTGACC TTCATTTGCA ATAG
 
Protein sequence
MIGVTRLYIH PVKSMRGLQL SHAMASVSGL ANDRALMITE LDGTFITARQ YPQMVLFTPA 
LLPDGLFIAA PDGQTATIRF ADFTAAPQPT EVWGTHFTAL VAPDAINTWL SHYFQRAVQL
RWVGNEPSRR VKHYPDVPLS FADGYPFLLI NDASFQALRQ RCSAGIKIEQ FRPNLVVTGA
DAFAEDSWKT IRIGEIIFDV VKPCSRCIFT TVSIERGRKH PSAEPLATLQ SFRTAENGDV
DFGQNLVARN TGIIRVGDTL EVLATKPPRP YGSGQVVESL VVSEKSEQAV TIHYQGKSLQ
GNNQQILLEQ LEQQGIRVPY SCRAGLCGCC KLTLVSGEVS ALKQSAIRGN GEILSCSCIP
QSDLHLQ