Gene PC1_1778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1778 
Symbol 
ID8132720 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp2050899 
End bp2051621 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content51% 
IMG OID644865066 
Productcondesin subunit E 
Protein accessionYP_003017355 
Protein GI253688165 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG3095] Uncharacterized protein involved in chromosome partitioning 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.106258 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCATCGA CAAATATTGA ACAATTTATG CCAGTGAAAC TGGCAACCGC GCTGTCGAAT 
AACCTCTTTC CTGCGCTGGA CAGCCAATTG CGCGCCGGGC GTCATATTGG CATTGAAGAG
CTGGAAAACC ACGTATTTCT GATGGATTTT CAGGAAGTGC TGGAGGAGTT CTACAGCCGT
TACAACGTGG AATTGATCCG CGCGCCGGAA GGTTTTTTCT ATCTGCGTCC GCGCTCCACC
ACGCTGATCC CCCGTTCTGT GCTGTCTGAG CTGGATATGA TGGTAGGGAA AATTCTCTGC
TATCTCTATC TGAGTCCAGA GCGCTTGGCG CACGAAGGCA TTTTCAGCCA GCAGGAGCTG
TATGAAGAGC TACTGAGCCT GGCGGATGAA AGTAAGCTGT TGAAGCTGGT TAACCAGCGT
TCTACCGGTT CCGATCTGGA TCGCCAGAAG CTGCAGGAAA AAGTCAGAAC CTCGCTTAAC
CGCTTACGTC GGTTAGGCAT GATCTACTTT ATGGGAAATG ACAGCAGCAA ATTCAGAATT
ACCGAATCGG TGTTCCGCTT CGGAGCTGAT GTACGCAGCG GCGATGATGC CCGCGAAGCG
CAGCTACGCA TGATTCGCGA TGGTGAAGCG ATGCCTGTTG AAGGTAGTTT GTCGCTGAAA
GATGACAGCG ACGATAACGA TCGCACCGAT GATACCGCGC CAGAAACGGG CGAGGATGAA
TAA
 
Protein sequence
MSSTNIEQFM PVKLATALSN NLFPALDSQL RAGRHIGIEE LENHVFLMDF QEVLEEFYSR 
YNVELIRAPE GFFYLRPRST TLIPRSVLSE LDMMVGKILC YLYLSPERLA HEGIFSQQEL
YEELLSLADE SKLLKLVNQR STGSDLDRQK LQEKVRTSLN RLRRLGMIYF MGNDSSKFRI
TESVFRFGAD VRSGDDAREA QLRMIRDGEA MPVEGSLSLK DDSDDNDRTD DTAPETGEDE