Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1778 |
Symbol | |
ID | 8132720 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 2050899 |
End bp | 2051621 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644865066 |
Product | condesin subunit E |
Protein accession | YP_003017355 |
Protein GI | 253688165 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG3095] Uncharacterized protein involved in chromosome partitioning |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.106258 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCATCGA CAAATATTGA ACAATTTATG CCAGTGAAAC TGGCAACCGC GCTGTCGAAT AACCTCTTTC CTGCGCTGGA CAGCCAATTG CGCGCCGGGC GTCATATTGG CATTGAAGAG CTGGAAAACC ACGTATTTCT GATGGATTTT CAGGAAGTGC TGGAGGAGTT CTACAGCCGT TACAACGTGG AATTGATCCG CGCGCCGGAA GGTTTTTTCT ATCTGCGTCC GCGCTCCACC ACGCTGATCC CCCGTTCTGT GCTGTCTGAG CTGGATATGA TGGTAGGGAA AATTCTCTGC TATCTCTATC TGAGTCCAGA GCGCTTGGCG CACGAAGGCA TTTTCAGCCA GCAGGAGCTG TATGAAGAGC TACTGAGCCT GGCGGATGAA AGTAAGCTGT TGAAGCTGGT TAACCAGCGT TCTACCGGTT CCGATCTGGA TCGCCAGAAG CTGCAGGAAA AAGTCAGAAC CTCGCTTAAC CGCTTACGTC GGTTAGGCAT GATCTACTTT ATGGGAAATG ACAGCAGCAA ATTCAGAATT ACCGAATCGG TGTTCCGCTT CGGAGCTGAT GTACGCAGCG GCGATGATGC CCGCGAAGCG CAGCTACGCA TGATTCGCGA TGGTGAAGCG ATGCCTGTTG AAGGTAGTTT GTCGCTGAAA GATGACAGCG ACGATAACGA TCGCACCGAT GATACCGCGC CAGAAACGGG CGAGGATGAA TAA
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Protein sequence | MSSTNIEQFM PVKLATALSN NLFPALDSQL RAGRHIGIEE LENHVFLMDF QEVLEEFYSR YNVELIRAPE GFFYLRPRST TLIPRSVLSE LDMMVGKILC YLYLSPERLA HEGIFSQQEL YEELLSLADE SKLLKLVNQR STGSDLDRQK LQEKVRTSLN RLRRLGMIYF MGNDSSKFRI TESVFRFGAD VRSGDDAREA QLRMIRDGEA MPVEGSLSLK DDSDDNDRTD DTAPETGEDE
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