Gene PC1_1773 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1773 
Symbol 
ID8132715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp2045435 
End bp2046748 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content50% 
IMG OID644865061 
Productpectate lyase 
Protein accessionYP_003017350 
Protein GI253688160 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGCTA AACGTTATAT CGCAAATTTT TTTCTCGGCG GTATGCTGAT GGGGGCTGCG 
GCGGGCAGCA GCGCGGCGGT GTATTACATG GCGCCCAACG GCAATGACGC GAATAACGGC
AGTAAAAACT CTCCCTGGAA AACGATCGAT CGCGCACAGA AAACATTAAA TCCCGGCGAC
CGCCTGTGGA TCCGTGGCGG TAACTACGTG TTTACCAAGG GGCTGAACGT CTGTGCAACG
CGTACTGATG TGGTGAACGC GATTACGCTG AATAAGAGCG GTACCGAAGG TAAGCGCATT
GAGTATTGGG CGTACAGCGG AGAAGTACCC GTGTTTGATT TCAGCCAGAT GCAGGATGAT
TGCCGCGTCA AAGGCTTCAA CGTTGTGGCA GACTGGATCT CTCTGAAAGG ACTGGAAATA
ACCGGTGTTC CGCAGCGCAA TAACCTTAAC CATGAATCCT GGGGAGTATG GATAAGGGGC
AGCAATAATA TATTCGAGCA ATTAAATATC CACCATATTA TGGGCACGGG TTTGTTTATC
CAGCGTGGAG GATATAACCT GGTATTGAAT AGTGACTCCC ACCATAATTA CGATCCGCTG
ACCTCTAATG GCGCTGGTCA AAGTGGCGAT GGTTTTGGTG CGCATATTCC GGCTAATCAG
CCAGGTAATA TTTTCCGCGG TTGCCGGGCA TGGTCAAACT CGGATGATGG CTTCGATTTA
ATTAATGCTT ATTCTCCGGT GCTGATTGAA AACTCTTGGG CGTGGTCACA CGGTTATTTG
CCGGGAACGA CGCAGTCGCT GCCGGCAGGT AATGGTAATG GCTTTAAAGT CGGTGGCTAC
GGCGGTGTTT ATGTGGCAAA TGCGGTGAAG CATACCGTGC GTAACTCGGT TGCGTTTTTA
AATAAAGCGG CCGGTTTTTA TGCGAACCAC CATCCGGTTG CGAACGATTT CTTTAACAAC
ACCGGTTATA AAAATAACCC TAACTTTAAT ATCCGCGGTA TTGATGCAAA CGGAAAAGCG
ATTGGGCTAG GTACGCTACG CAATAACGTT TCTCATGGCG GTAAAGACCT GTCGTTCTCC
GACGGTGCGA ATATGCGCTA TAACTCATGG GATCTGAAAA TTGCGGTATC AGATTCTGAC
TTCGAGAGCG TTTCGGTGAC CGGCTGGGAT GCACCGCGTC AGGCGGATGG CAGCTTGCCA
GTACTGAAGA GCCTGCATCT TGCGTCGGGT AGTGCGCTAA TCAACAAGGG TGGGGATGTC
AAACTGCCTT ACAAAGGTTC AGCCCCAGAT CTGGGTGCTT TTGAACGCGA ATAA
 
Protein sequence
MNAKRYIANF FLGGMLMGAA AGSSAAVYYM APNGNDANNG SKNSPWKTID RAQKTLNPGD 
RLWIRGGNYV FTKGLNVCAT RTDVVNAITL NKSGTEGKRI EYWAYSGEVP VFDFSQMQDD
CRVKGFNVVA DWISLKGLEI TGVPQRNNLN HESWGVWIRG SNNIFEQLNI HHIMGTGLFI
QRGGYNLVLN SDSHHNYDPL TSNGAGQSGD GFGAHIPANQ PGNIFRGCRA WSNSDDGFDL
INAYSPVLIE NSWAWSHGYL PGTTQSLPAG NGNGFKVGGY GGVYVANAVK HTVRNSVAFL
NKAAGFYANH HPVANDFFNN TGYKNNPNFN IRGIDANGKA IGLGTLRNNV SHGGKDLSFS
DGANMRYNSW DLKIAVSDSD FESVSVTGWD APRQADGSLP VLKSLHLASG SALINKGGDV
KLPYKGSAPD LGAFERE