Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1760 |
Symbol | |
ID | 8132702 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 2031317 |
End bp | 2032687 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644865048 |
Product | amino acid permease-associated region |
Protein accession | YP_003017337 |
Protein GI | 253688147 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGCTTG ATACATCTCT GCCTAACGCT GGCGCAAAAC GTGCTCAGTT AAAAAGAACG CTTACGCTGT GGCCCGTTGT TATGATGGGA CTGGCGTACA TGCAGCCGAT GACCATTTTT GATACCTTCG GTATCGTGTC TGGCCTGACC GACGGCCATG TGGCGACCGC CTATGCGTTT GCGCTGGTGG CTATTCTGTT CACGGCGCTG AGCTATGGCA AATTGGTAAA ACGTTTCCCG TCAGCGGGTT CTGCTTATAC CTATGCGCAA AAAGCGATCA GCCCGCACGT TGGGTTTATG GTCGGCTGGT CATCGCTGCT GGACTATCTG TTCATGCCGA TGATCAACAT TCTGTTGGCG AAAATCTATC TGGAAGCGAT CTTCCCCGGC GTGCCGTCGT GGATTTTTGT CGCGGTACTG GTCGGGCTGA TGACGCTGTT TAATCTGCGT GGCATCAATC TGGTTGCTAA CCTGAACTCC ATTATCGTGG TAGTACAGGT GGCTATCATG GCCGTGTTCC TGGGGCTGGT CATCCACGGT GTTTATCTGG GTGAAGGTGC AGGTACGCTG ACCAGTACGC GTCCATTCTG GTCTGAGAAC GCGCATGTGG TGCCGATGAT TACCGGGGCA ACGATTCTCT GCTTCTCGTT CCTGGGCTTT GACGGCATCA GCTCGCTGTC GGAAGAGACG CAGGATGCCG GTCGGGTGAT TCCAAAAGCC ATCTTCCTGA CAGCGCTGAT CGGTGGTGTG ATCTTTGTTG CCGTGGCGTA CTTTCTGCAA CTGTACTTCC CGGACATTTC CCGCTTTAAA GAGCCGGATG CGTCTCAGCC GGAAATCATG CTGTATGTTG CGGGTAAATT CTTCCAGTCT ATTATTCTGG TGTTCTCCTG CGTCACTGTG TTGGCGTCCG GTATGGCCGC ACACGCCGGT GTTTCACGTC TGATGTATGT GATGGGACGC GATGGCGTGT TCCCTGAGCG CTTCTTCGGT TATATCCATC CGAAATGGCG TACCCCGGCG CTGAACGTCC TGCTGGTTGG CGTGATCGCA CTGTCTGCGG TGTCGTTCGA TCTGGTGACG GCAACTGCGC TGATTAACTT CGGTGCGCTG GTGGCGTTTA CGTTCGTGAA CCTGTCGGTT ATTTCACAGT TCTATATTCG TGAACGCCGT AACCGTACTG TGAAAGACAC CATTAACTTC CTCGTACTGC CTGTGCTGGG CGCGTTAACG GTAGGGGCAC TGTGGGTGAA TCTGGAAGCC AGCTCGATGA CGCTGGGTCT GGTGTGGGCA ACGATCGGGC TGCTATATCT GGCGTTTGTG ACGCGCAGCT TCCGTCAGCC AGTACCGCAA TGCAGTGAAG AGCCAGTGTA A
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Protein sequence | MSLDTSLPNA GAKRAQLKRT LTLWPVVMMG LAYMQPMTIF DTFGIVSGLT DGHVATAYAF ALVAILFTAL SYGKLVKRFP SAGSAYTYAQ KAISPHVGFM VGWSSLLDYL FMPMINILLA KIYLEAIFPG VPSWIFVAVL VGLMTLFNLR GINLVANLNS IIVVVQVAIM AVFLGLVIHG VYLGEGAGTL TSTRPFWSEN AHVVPMITGA TILCFSFLGF DGISSLSEET QDAGRVIPKA IFLTALIGGV IFVAVAYFLQ LYFPDISRFK EPDASQPEIM LYVAGKFFQS IILVFSCVTV LASGMAAHAG VSRLMYVMGR DGVFPERFFG YIHPKWRTPA LNVLLVGVIA LSAVSFDLVT ATALINFGAL VAFTFVNLSV ISQFYIRERR NRTVKDTINF LVLPVLGALT VGALWVNLEA SSMTLGLVWA TIGLLYLAFV TRSFRQPVPQ CSEEPV
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