Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1754 |
Symbol | |
ID | 8132696 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 2025722 |
End bp | 2026597 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644865042 |
Product | citrate lyase, beta subunit |
Protein accession | YP_003017331 |
Protein GI | 253688141 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2301] Citrate lyase beta subunit |
TIGRFAM ID | [TIGR01588] citrate lyase, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.42542 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAAC TTCGCCGCAG TATGCTGTTC CTCCCCGGCG CTAACGCCGC CATGCTGTCC AATGCATTTA TCTATAAGCC TGACTCCATC ATGTTCGATC TGGAAGATGC GGTCTCCCTG CGGGAGAAAG ATACCGCACG CCTGCTGGTT TTCCATGCGC TACAACACCC GATGTACCGC GATATTGAAA CCGTGGTGCG TATCAACCAG CTCAGTACAC CGTTTGGTCT GCTGGATCTT GAAGCGGCGG TGCGCGGCGG TGCCGATGTG ATCCGTCTGC CGAAAACGGA CTCCACCGAT GATGTAGATG AGCTGGAACA TCATCTGGTT CGTATCGAAA AAGCCTGCGG CCGTGAAGTG GGTTCTACGC GCATCATGGC AGCGATTGAG TCTGCGGTTG GCGTCATTAA CGCGGTCGCG ATTGCACGTT CTTCCGAGCG CATGATCGGG ATTGCGCTGG CGGCGTTTGA CTACGTGATG GATATGCAAA CAGAGCGCGG CGATGGCACG GAGCTGTTTT ATGCCCGCTG CGCGGTGCTG CACGCGGCTC GCGCTGCCGG TATCGACGCC TTCGACGTGG TCTATCCCAA CGTCAATGAC GATGCAGGTT TCCTGAAAGA GGTCGATCTG ATCCGCAAGC TGGGCTTCAA CGGTAAATCC CTGATTAACC CGCGCCAGAT TGAGCTGTTA CACAACGCTT ATGCGCCTAC GCAGGATGAA GTGGACTATT CCCATCTGGT GATCAAAGCC GCCGAAGAGG GTGAGCGTGC TGGTTTGGGC GTTATTTCCC TGAATGGAAA AATGATCGAC GGGCCGATTA TCGACCACGC CAGAAGAGTG CTGGAACGTG CTCAGGCCTC CGGCGTTCGC AAATAG
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Protein sequence | MNKLRRSMLF LPGANAAMLS NAFIYKPDSI MFDLEDAVSL REKDTARLLV FHALQHPMYR DIETVVRINQ LSTPFGLLDL EAAVRGGADV IRLPKTDSTD DVDELEHHLV RIEKACGREV GSTRIMAAIE SAVGVINAVA IARSSERMIG IALAAFDYVM DMQTERGDGT ELFYARCAVL HAARAAGIDA FDVVYPNVND DAGFLKEVDL IRKLGFNGKS LINPRQIELL HNAYAPTQDE VDYSHLVIKA AEEGERAGLG VISLNGKMID GPIIDHARRV LERAQASGVR K
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