Gene PC1_1754 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1754 
Symbol 
ID8132696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp2025722 
End bp2026597 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content56% 
IMG OID644865042 
Productcitrate lyase, beta subunit 
Protein accessionYP_003017331 
Protein GI253688141 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2301] Citrate lyase beta subunit 
TIGRFAM ID[TIGR01588] citrate lyase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.42542 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAC TTCGCCGCAG TATGCTGTTC CTCCCCGGCG CTAACGCCGC CATGCTGTCC 
AATGCATTTA TCTATAAGCC TGACTCCATC ATGTTCGATC TGGAAGATGC GGTCTCCCTG
CGGGAGAAAG ATACCGCACG CCTGCTGGTT TTCCATGCGC TACAACACCC GATGTACCGC
GATATTGAAA CCGTGGTGCG TATCAACCAG CTCAGTACAC CGTTTGGTCT GCTGGATCTT
GAAGCGGCGG TGCGCGGCGG TGCCGATGTG ATCCGTCTGC CGAAAACGGA CTCCACCGAT
GATGTAGATG AGCTGGAACA TCATCTGGTT CGTATCGAAA AAGCCTGCGG CCGTGAAGTG
GGTTCTACGC GCATCATGGC AGCGATTGAG TCTGCGGTTG GCGTCATTAA CGCGGTCGCG
ATTGCACGTT CTTCCGAGCG CATGATCGGG ATTGCGCTGG CGGCGTTTGA CTACGTGATG
GATATGCAAA CAGAGCGCGG CGATGGCACG GAGCTGTTTT ATGCCCGCTG CGCGGTGCTG
CACGCGGCTC GCGCTGCCGG TATCGACGCC TTCGACGTGG TCTATCCCAA CGTCAATGAC
GATGCAGGTT TCCTGAAAGA GGTCGATCTG ATCCGCAAGC TGGGCTTCAA CGGTAAATCC
CTGATTAACC CGCGCCAGAT TGAGCTGTTA CACAACGCTT ATGCGCCTAC GCAGGATGAA
GTGGACTATT CCCATCTGGT GATCAAAGCC GCCGAAGAGG GTGAGCGTGC TGGTTTGGGC
GTTATTTCCC TGAATGGAAA AATGATCGAC GGGCCGATTA TCGACCACGC CAGAAGAGTG
CTGGAACGTG CTCAGGCCTC CGGCGTTCGC AAATAG
 
Protein sequence
MNKLRRSMLF LPGANAAMLS NAFIYKPDSI MFDLEDAVSL REKDTARLLV FHALQHPMYR 
DIETVVRINQ LSTPFGLLDL EAAVRGGADV IRLPKTDSTD DVDELEHHLV RIEKACGREV
GSTRIMAAIE SAVGVINAVA IARSSERMIG IALAAFDYVM DMQTERGDGT ELFYARCAVL
HAARAAGIDA FDVVYPNVND DAGFLKEVDL IRKLGFNGKS LINPRQIELL HNAYAPTQDE
VDYSHLVIKA AEEGERAGLG VISLNGKMID GPIIDHARRV LERAQASGVR K