| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1748 |
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| Symbol | |
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| ID | 8132690 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2019043 |
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| End bp | 2019744 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644865036 |
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| Product | response regulator receiver and unknown domain protein |
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| Protein accession | YP_003017325 |
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| Protein GI | 253688135 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG4565] Response regulator of citrate/malate metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.013924 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAGCACA CTGAACATTT CGATGTCTTA ATCGTTGAAG ATGAAAGTAA GCTGGCAACT
ATTCATGCTG AATTTATTGA AAAGCATTTC AATCTGCGTG TTGTCGGGAT TGCCGCGACG
CTTTTTGAAG CCAAAAAACT CCTTCAACAA CATAGACCAC GCCTGATCCT GCTCGATAAC
TATTTGCCCG ACGGCGAAGG GGTTTCGCTG ATTGAAAGCC AACTGCTCAA AGGAATGGAC
TGTTCCGTCA TTTTTATTAC CGCAGCCAGC GATATGAACA CCTGCGCTCA GGCCATTCGC
TGCGGAGCCT TTGACTACAT CATCAAGCCG CTCTCCTACC CGCGACTGCG CTCTTCGCTG
GAGCGATTTA TTCAATTTGT AAAAACCCAG CACACCTACA AAATTGTCGA TCAACAGAAC
GTCGATATTC TCTATCAGCT GCAATCGTCC GGTGCTGCGC CTTCCTCATC AACAAAAGGT
ATTGAGGAGA ACACGCTGGG GTTGATCAAG CAGATTTTTG CCAGCGATGG CGGTGAGACG
CTGTATTCTG TTGATGATAT CGTCGAAAAA ACCGGGTTGA GTAAAACGAC GGCGCGCCGC
TATCTGGAGT TTTGTGTTGA AAACCAGTTT CTCGATATCG AAATGCGTTA CGGAAAGATT
GGTCATCCAC GTCGGTTGTA TCGTACAAAG CACACCCACT AG
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| Protein sequence | MQHTEHFDVL IVEDESKLAT IHAEFIEKHF NLRVVGIAAT LFEAKKLLQQ HRPRLILLDN
YLPDGEGVSL IESQLLKGMD CSVIFITAAS DMNTCAQAIR CGAFDYIIKP LSYPRLRSSL
ERFIQFVKTQ HTYKIVDQQN VDILYQLQSS GAAPSSSTKG IEENTLGLIK QIFASDGGET
LYSVDDIVEK TGLSKTTARR YLEFCVENQF LDIEMRYGKI GHPRRLYRTK HTH
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