Gene PC1_1741 details

Gene Information

• Locus tag: PC1_1741
• Symbol: hisH
• ID: 8132683
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium carotovorum subsp. carotovorum PC1
• Kingdom: Bacteria
• Replicon accession: NC_012917
• Strand: -
• Start bp: 2012050
• End bp: 2012640
• Gene Length: 591 bp
• Protein Length: 196 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 644865029
• Product: imidazole glycerol phosphate synthase subunit HisH
• Protein accession: YP_003017318
• Protein GI: 253688128
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0118] Glutamine amidotransferase
• TIGRFAM ID: [TIGR01855] imidazole glycerol phosphate synthase, glutamine amidotransferase subunit

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.0932187
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGGTCG TCATTCTTGA TACCGGCTGC GCCAACCTCT CTTCGGTAAC CTATGCCGTT 
CAGCGATTGG GGTATACCCC CGTAGTCAGT CGCGAGGCCG AGATAGTCCT GCAGGCAGAT 
AAGCTGTTTC TGCCGGGCGT TGGCACCGCG CAGGCGGCGA TGAATCAACT GGAAGAGCGT 
GAACTGATCG CGCTGATTAA AGCCTGTACT CAACCGGTTC TCGGTATTTG CCTCGGCATG 
CAATTGCTGG GGACACACAG CGACGAAAAT GGTGGTATCC CCACGCTGGG GATTGTCGAT 
TCGCCAGTGC AAAAGATGGT TGACCACGGC TTGCCGCTAC CACACATGGG CTGGAATCAG 
GTGATTCCGA AGGCCGGACA CCGTTTATTC CGCGATATCG ATGACGGTGC CTATTTCTAT 
TTCGTTCACA GCTACGCCAT GCCAGTGTGC GAAAACACGA TTGCCCAAGC CAACTACGGC 
GAAGCGTTCA CTGCCGCGCT GGAAAAAGAT AATTTCTTTG GCGTGCAATT CCACCCAGAG 
CGCTCCGGTG CTGCGGGTGC GCAACTGCTG AAAAACTTTC TGGAGATGTA G 

 

Protein sequence

MKVVILDTGC ANLSSVTYAV QRLGYTPVVS REAEIVLQAD KLFLPGVGTA QAAMNQLEER 
ELIALIKACT QPVLGICLGM QLLGTHSDEN GGIPTLGIVD SPVQKMVDHG LPLPHMGWNQ 
VIPKAGHRLF RDIDDGAYFY FVHSYAMPVC ENTIAQANYG EAFTAALEKD NFFGVQFHPE 
RSGAAGAQLL KNFLEM