| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1740 |
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| Symbol | |
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| ID | 8132682 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2011306 |
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| End bp | 2012043 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644865028 |
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| Product | 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase |
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| Protein accession | YP_003017317 |
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| Protein GI | 253688127 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0106] Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase |
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| TIGRFAM ID | [TIGR00007] phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.245916 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTATTC CCGCATTAGA TCTGATTGAT GGACAGGTTG TCCGTCTGCA TCAGGGTGAT
TATGGCCAAC AGCGCCAGTA CGGCAGCGAC CCGCTTCCCC GCCTGCAGGA TTACCAGCAG
CAAGGGGCTG GCGTGCTGCA CTTGGTGGAT TTGACCGGTG CAAAAGATCC TTCTGCCCGC
CAGATTCCGC TATTAACCAC GCTGTTGGCT GGCGTTAGCG TACCGGTTCA GATCGGCGGC
GGCATTCGCA CCGAACAGGA CGTGGAAGCG TTATTAAAAG CTGGCGCCAG CCGTGTCGTT
ATCGGCTCCA CCGCCGTGAA ACAGCCGGAA TTGGTTCAGC AATGGTTCAC CCGCTACGGC
GCAGAAGCGC TGGTGCTGGC GCTGGACGTG CGTATTGACG CCAACGGCAC AAAGTTCGTC
GCCATCAGCG GCTGGCAGGA AAATTCTGAC GCCACGCTTG AGCAGGTCGT CGAGCAATAT
TTGCCGTTCG GTCTGAAGCA TGTACTGTGT ACTGACATTT CCCGTGACGG TACGCTGAGC
GGCTCCAACG TCGAGCTCTA TCGTGAAATC AGCCAGCGCT ACCCGCAGAT TGCCTTTCAG
GCATCCGGTG GTATAGGTAA CCTGACAGAT ATCGCCAATT TGCGCGGTAG CGGTGTGCAA
GGCGTGATCG TGGGTCGTGC GCTGCTGGAA GGTAAATTTA ACGTCGCGGA GGCTATTTCA
TGCTGGCAAA ACGGATAA
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| Protein sequence | MIIPALDLID GQVVRLHQGD YGQQRQYGSD PLPRLQDYQQ QGAGVLHLVD LTGAKDPSAR
QIPLLTTLLA GVSVPVQIGG GIRTEQDVEA LLKAGASRVV IGSTAVKQPE LVQQWFTRYG
AEALVLALDV RIDANGTKFV AISGWQENSD ATLEQVVEQY LPFGLKHVLC TDISRDGTLS
GSNVELYREI SQRYPQIAFQ ASGGIGNLTD IANLRGSGVQ GVIVGRALLE GKFNVAEAIS
CWQNG
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