| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1733 |
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| Symbol | |
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| ID | 8132675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 2003353 |
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| End bp | 2004642 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644865021 |
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| Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
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| Protein accession | YP_003017310 |
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| Protein GI | 253688120 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
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| TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00764401 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGGAAT CCCTGACCCT ACAACCCATT AAACTGATTA ACGGTACCCT TAACCTTCCA
GGATCAAAAA GCGTCTCTAA CCGCGCGCTT TTACTGGCTG CGTTGTCCGA AGGTAAGACT
CGCCTGACTA ACCTGTTAGA CAGTGACGAT GTCCGCCATA TGCTGACTGC TTTAGCGGCG
CTGGGTGTGG AATATCATCT GTCATCCGAT CGGACCGTGT GTGAGATTAC CGGTCTGGGT
GGTGCGTTTA CGGCATCGCA ACCGCTGGAG CTGTTTTTAG GAAATGCCGG TACGGCGATG
CGTCCACTGG CCGCGGCCTT ATGTCTGACG GATGGCGATA TTGTGCTGAC GGGTGAGCCC
CGTATGAAAG AGCGTCCAAT CGGGCATCTG GTCGACGCGC TGCGTCAGGG CGGGGCAAAA
ATTGACTATC TGGAGCAGGA AAACTATCCA CCGCTTCGTC TGCATGGCGG TTTTCAGGGC
GGCGAAATCA GCGTAGACGG TAGTGTATCC AGCCAGTTCC TGACGGCACT GTTGATGACT
GCACCTCTGG CCGCGCAGGA TACGCAAATC AGCATTCAGG GCGATCTGGT TTCTAAACCG
TATATCGATA TTACGCTGCA TATGATGAAA GCGTTTGGGA TTGAAGTACG TAATGAGAAC
TACCAACGCT TTTTTGTCGC TGGGCGCCAG CAGTACCGCT CACCGGGTGA TTATCTGGTG
GAAGGCGATG CGTCATCGGC TTCTTACTTT CTGGCAGCTG CGGCGATTAA GGGCGGCGTT
GTGCGCGTGA CCGGTGTTGG CCGTAATAGC GTACAGGGTG ATATCCGCTT CGCCGATGTT
CTGGAAAGAA TGGGGGCGAT CGTGCGCTGG GGTGAGGATT ATATTGAATG CGAACGCGGC
GAACTGCACG CAATCGACAT GGATATGAAC CACATCCCGG ATGCTGCGAT GACTATCGCA
ACGGCGGCGC TTTTCGCACA GGGCGGCACG ACTACGCTGC GTAATATCTA TAACTGGCGT
GTGAAAGAGA CCGATCGTCT GGCTGCCATG GCGATTGAGC TGCGTAAAGT GGGAGCGGAA
GTGGAAGAGG GTAACGACTA CATTCGCATT ACACCGCCAG CCAAGCTGAA AGCGGCAGAA
ATCGGGACAT ACAACGATCA CCGTATGGCG ATGTGTTTCT CGCTGGTGGC GCTGTCGGAC
ACACCGGTCA CGATTCTCGA TCCGAAATGT ACCGCCAAAA CCTTCCCCGA CTACTTTGAA
CAGCTGGCGC GTCTCAGCGA ACTGGCTTGA
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| Protein sequence | MQESLTLQPI KLINGTLNLP GSKSVSNRAL LLAALSEGKT RLTNLLDSDD VRHMLTALAA
LGVEYHLSSD RTVCEITGLG GAFTASQPLE LFLGNAGTAM RPLAAALCLT DGDIVLTGEP
RMKERPIGHL VDALRQGGAK IDYLEQENYP PLRLHGGFQG GEISVDGSVS SQFLTALLMT
APLAAQDTQI SIQGDLVSKP YIDITLHMMK AFGIEVRNEN YQRFFVAGRQ QYRSPGDYLV
EGDASSASYF LAAAAIKGGV VRVTGVGRNS VQGDIRFADV LERMGAIVRW GEDYIECERG
ELHAIDMDMN HIPDAAMTIA TAALFAQGGT TTLRNIYNWR VKETDRLAAM AIELRKVGAE
VEEGNDYIRI TPPAKLKAAE IGTYNDHRMA MCFSLVALSD TPVTILDPKC TAKTFPDYFE
QLARLSELA
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