Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1728 |
Symbol | pflA |
ID | 8132670 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 1995432 |
End bp | 1996172 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644865016 |
Product | pyruvate formate lyase-activating enzyme 1 |
Protein accession | YP_003017305 |
Protein GI | 253688115 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1180] Pyruvate-formate lyase-activating enzyme |
TIGRFAM ID | [TIGR02493] pyruvate formate-lyase 1-activating enzyme |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.548183 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGTAA TCGGTCGCAT CCACTCCTTT GAATCCTGCG GCACTGTCGA TGGCCCAGGC ATCCGTTTCA TCATCTTCTT CCAGGGCTGC CTGATGCGCT GCCTGTATTG CCATAACCGT GATACTTGGG ATACGCACGG CGGCAAAGAA GTGACGGTGG AAGAACTTAT GAAAGAAGTC GTGACCTACC GCCACTTTAT GAATGCATCC GGCGGTGGCG TAACAGCATC CGGCGGCGAG GCCATTCTTC AGGCCGAATT TGTGCGCGAC TGGTTCCGCG CCTGCAAGGC TGAAGGTATC AACACCTGTC TGGATACCAA CGGGTTTGTA CGCCGTTATG ACCCCGTCAT TGACGAGCTA CTGGACGTCA GCGACTTAGT GATGCTCGAT CTGAAGCAAA TGAACGACGA CATACACCAG AATTTAGTGG GCGTATCGAA CCACCGTACT CTGGATTTCG CACGTTATCT GGCAAAGCGC AACCAGCGTA CCTGGATACG TTATGTGGTC GTCCCCGGCT GGTCTGATGA TGATGCGTCC GCACACAAGC TGGGTGAGTT CACCAAGGAT ATGACGAACA TCGAGAAAAT TGAGCTTCTC CCCTACCATG AACTTGGCAA ACACAAGTGG ATCGCAATGG GTGAAGAGTA CAAGTTAGAC GGTGTGAAAC CGCCGAAGGC CGATACCATG GATCGTATTA AATCGATTCT TGAAAGCTAC GGTCACAAGG TCATGTACTA A
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Protein sequence | MSVIGRIHSF ESCGTVDGPG IRFIIFFQGC LMRCLYCHNR DTWDTHGGKE VTVEELMKEV VTYRHFMNAS GGGVTASGGE AILQAEFVRD WFRACKAEGI NTCLDTNGFV RRYDPVIDEL LDVSDLVMLD LKQMNDDIHQ NLVGVSNHRT LDFARYLAKR NQRTWIRYVV VPGWSDDDAS AHKLGEFTKD MTNIEKIELL PYHELGKHKW IAMGEEYKLD GVKPPKADTM DRIKSILESY GHKVMY
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