Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1726 |
Symbol | |
ID | 8132668 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 1992655 |
End bp | 1993764 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644865014 |
Product | hypothetical protein |
Protein accession | YP_003017303 |
Protein GI | 253688113 |
COG category | [S] Function unknown |
COG ID | [COG3535] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTCGTT ATATTAATGT ACAAACCATT GATGATATAG CACTAGGGGC CGCGGTTCTC GGTACTGGAG GCGGCGGCGA CCCGTATGTA GGTTCTTTGA TGGCAAAACA CGCATTAAAA AATGCGGTCA AGGTTCCTGT ATTCGATTTA GATGAAATTA AAGACGATGA GCTGTTTGTT CCCTGTAGCA TGATAGGTGC AACGACGGTA GTTGTAGAAA AAATTATGTC AGCTAGCCAG TTTGTTCTGG CGTTTGACGC GATGGAAACG GCGCTTCAGC GACCTATCAC TGCAACATTT CCCATCGAAG TTGGCGGTAT TAATTCGCTC ATACCGTTTG TTGTTGCGGC TGCAAAAGGA GTACCTGTCG TTGATTGTGA TGCGATGGGT AGGGCCTTTC CCGAAGCGCA GATGGTGACC TTTTTTCTTG ATAATTTACG CTCTGCGCCA AATACATTAG CGGATGAAAA GGGAAACGCG GTTACCTTAA ATCCTATTGA TGGCATGTGG TCTGAGCGTT TGGCCAGAGT GATTGCGGAA CAAATGGGGG CCGCCTGTGC CATGTGTGAT TACCCATTGC GCGGTAGCCA ACTTAAGCGT AGTGCCATCA AAGGTACACT CACACTGGCG CAGAATATTG GAAGAACGTT GCGTCAGGCA CACCAATCGG GAAGCCATCC CGTGCAATCC TTACTGACCA TACTGAATGG CTACGTTATT GCATCAGGCA AGGTTGTTGA TGTTGATCGT CGCACCATTG GAGGGCTTGC CCGGGGCAAA GTAGTTCTGG ATGGCATGGG GAACGATAAA GGTGAGTCGT TTACGGTGCT TTTCCAGAAT GAGCTATTGC TTGCTTATCG TTCGTCACAG GTGGCAAATC CTACGCAGGA TAATCTGCTG GCTGTTGTGC CTGATTTAAT CTCCATAGTA GACAGTGAAA CCGGACGTCC AATTATTACG GAACATTTAC GTTATGGGCA GCGAGTCGAT GTTATTGCCT ATCCGTGCAA TGACAAGTGG CGAACGCCAA AAGGGATTGA CGTTGCGGGG CCGGAGTATT TCGGTTATCC GGTGCAGTAT GTGCCGATAG AACAGCTTGC AAATCGCTGA
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Protein sequence | MSRYINVQTI DDIALGAAVL GTGGGGDPYV GSLMAKHALK NAVKVPVFDL DEIKDDELFV PCSMIGATTV VVEKIMSASQ FVLAFDAMET ALQRPITATF PIEVGGINSL IPFVVAAAKG VPVVDCDAMG RAFPEAQMVT FFLDNLRSAP NTLADEKGNA VTLNPIDGMW SERLARVIAE QMGAACAMCD YPLRGSQLKR SAIKGTLTLA QNIGRTLRQA HQSGSHPVQS LLTILNGYVI ASGKVVDVDR RTIGGLARGK VVLDGMGNDK GESFTVLFQN ELLLAYRSSQ VANPTQDNLL AVVPDLISIV DSETGRPIIT EHLRYGQRVD VIAYPCNDKW RTPKGIDVAG PEYFGYPVQY VPIEQLANR
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