Gene PC1_1726 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1726 
Symbol 
ID8132668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp1992655 
End bp1993764 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content48% 
IMG OID644865014 
Producthypothetical protein 
Protein accessionYP_003017303 
Protein GI253688113 
COG category[S] Function unknown 
COG ID[COG3535] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTCGTT ATATTAATGT ACAAACCATT GATGATATAG CACTAGGGGC CGCGGTTCTC 
GGTACTGGAG GCGGCGGCGA CCCGTATGTA GGTTCTTTGA TGGCAAAACA CGCATTAAAA
AATGCGGTCA AGGTTCCTGT ATTCGATTTA GATGAAATTA AAGACGATGA GCTGTTTGTT
CCCTGTAGCA TGATAGGTGC AACGACGGTA GTTGTAGAAA AAATTATGTC AGCTAGCCAG
TTTGTTCTGG CGTTTGACGC GATGGAAACG GCGCTTCAGC GACCTATCAC TGCAACATTT
CCCATCGAAG TTGGCGGTAT TAATTCGCTC ATACCGTTTG TTGTTGCGGC TGCAAAAGGA
GTACCTGTCG TTGATTGTGA TGCGATGGGT AGGGCCTTTC CCGAAGCGCA GATGGTGACC
TTTTTTCTTG ATAATTTACG CTCTGCGCCA AATACATTAG CGGATGAAAA GGGAAACGCG
GTTACCTTAA ATCCTATTGA TGGCATGTGG TCTGAGCGTT TGGCCAGAGT GATTGCGGAA
CAAATGGGGG CCGCCTGTGC CATGTGTGAT TACCCATTGC GCGGTAGCCA ACTTAAGCGT
AGTGCCATCA AAGGTACACT CACACTGGCG CAGAATATTG GAAGAACGTT GCGTCAGGCA
CACCAATCGG GAAGCCATCC CGTGCAATCC TTACTGACCA TACTGAATGG CTACGTTATT
GCATCAGGCA AGGTTGTTGA TGTTGATCGT CGCACCATTG GAGGGCTTGC CCGGGGCAAA
GTAGTTCTGG ATGGCATGGG GAACGATAAA GGTGAGTCGT TTACGGTGCT TTTCCAGAAT
GAGCTATTGC TTGCTTATCG TTCGTCACAG GTGGCAAATC CTACGCAGGA TAATCTGCTG
GCTGTTGTGC CTGATTTAAT CTCCATAGTA GACAGTGAAA CCGGACGTCC AATTATTACG
GAACATTTAC GTTATGGGCA GCGAGTCGAT GTTATTGCCT ATCCGTGCAA TGACAAGTGG
CGAACGCCAA AAGGGATTGA CGTTGCGGGG CCGGAGTATT TCGGTTATCC GGTGCAGTAT
GTGCCGATAG AACAGCTTGC AAATCGCTGA
 
Protein sequence
MSRYINVQTI DDIALGAAVL GTGGGGDPYV GSLMAKHALK NAVKVPVFDL DEIKDDELFV 
PCSMIGATTV VVEKIMSASQ FVLAFDAMET ALQRPITATF PIEVGGINSL IPFVVAAAKG
VPVVDCDAMG RAFPEAQMVT FFLDNLRSAP NTLADEKGNA VTLNPIDGMW SERLARVIAE
QMGAACAMCD YPLRGSQLKR SAIKGTLTLA QNIGRTLRQA HQSGSHPVQS LLTILNGYVI
ASGKVVDVDR RTIGGLARGK VVLDGMGNDK GESFTVLFQN ELLLAYRSSQ VANPTQDNLL
AVVPDLISIV DSETGRPIIT EHLRYGQRVD VIAYPCNDKW RTPKGIDVAG PEYFGYPVQY
VPIEQLANR