| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1725 |
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| Symbol | |
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| ID | 8132667 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 1991313 |
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| End bp | 1992617 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644865013 |
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| Product | permease for cytosine/purines uracil thiamine allantoin |
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| Protein accession | YP_003017302 |
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| Protein GI | 253688112 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1457] Purine-cytosine permease and related proteins |
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| TIGRFAM ID | [TIGR00800] NCS1 nucleoside transporter family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCTCAAG GGAATGCTGT ACCTGGAAAA GAACAACAGG GGCGGCAAAT CTATGATTAC
GAATACGAAC CTGTCCCTGC TGAAGCGAGA AAAAGCTGGT ATGTTATTGC TTTAATATGG
CTGGCAATGG GGATTGATAT CTCAGGTTTA TTCCTTGGTG CTTTCTTAAG CGGAGGATTG
CCTTTCTCCC AAGCTGTTAG CGCCACGCTT ATCGGTTCTG CCTTTTTAGG TGTATTGGCC
GCATTATGCG CGAACGTCGG TTATGGCTGT GGGTTATCAA CAACGCTACT AAGTATCTCC
GTTTTTGGAC GCTTTGGCGG AAAGCTTATT GGTATTTTCT CTGCTGTATC ATTGGTTGGT
TGGTTTGCTT TTCAACTCGA TTTTTTTGGC GTAATGCTGC AAAAAGCACT GTTACATTAT
CAAATTGAGC CAAGTCGTTT TCTTATTTTG GTTTTTGGCA TGGCGCTGAT GACCTCTACG
GCTATCTGGG GTGTCAGAGC ATTGGGTAAA CTGAGTGTAT TCAGCGTGCC ACTCATGTTG
ATATTGATAA TTACAGGCCT GGTTTTAGCG GCGAATAACC ACCCCGAAAT ACCCCTCCCG
ATAATTAAAG CACCGATTAG TATGGGAAGC GCTATCTCTT ATGTTGTTTC TATCTGGATA
GTCTCTGCCG TGATGTCCCC GGATATAGCT CGCTATGCTA AAACACGTAA AGATGCGTTA
CTTGGTGCGG GATTGGGGTT CTTTTTAGGT AATAGCTCAA CAATATTAGT TGCGCTTATT
CTGACTCATC TTGTCGGTAC AGAAGATTTA GTTGAGGTGT TTTTCAGTAT TGGTTTGGGG
ATGTCTGCAA TTGTGGTGCT TATTTTTGCC CAGTGGACAA CAAATAGTAC CAACCTTGTC
TCCGCATCAT TGGGGCTATC CGTTGTTATT CGAGCACTAT CACGGCCGGT ATTGGTTGTG
CTAATGGCTA TTGCCGGGTT GCTGTTAGCG TATAACGGTA TGATTAATAA TTTTACCCAA
TTCTTGTCGC TGCTCGGTGT CCTGATTTCC CCTATCGCAG GTGTTTATCT CGTCGAATAT
TATTTTATTA AGTCCTCACG TTTGCAGAAA AATGTATCAG AGGCTTCATT CTTGAATGTG
GCGGCGGCTA TATCTTGGTC ACTTGGTAGT CTTGTGAGCC TGTTAACTTC CCCAGATTTT
TTTGATTTAT TTACGATAAG TTCGATCTCT GCTCTGGATG GCGTCATTGT AAGTATGGTG
ATTTATATCG GCATGCATAA AATTTTCCCT CAATTGGCGG ATTAA
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| Protein sequence | MSQGNAVPGK EQQGRQIYDY EYEPVPAEAR KSWYVIALIW LAMGIDISGL FLGAFLSGGL
PFSQAVSATL IGSAFLGVLA ALCANVGYGC GLSTTLLSIS VFGRFGGKLI GIFSAVSLVG
WFAFQLDFFG VMLQKALLHY QIEPSRFLIL VFGMALMTST AIWGVRALGK LSVFSVPLML
ILIITGLVLA ANNHPEIPLP IIKAPISMGS AISYVVSIWI VSAVMSPDIA RYAKTRKDAL
LGAGLGFFLG NSSTILVALI LTHLVGTEDL VEVFFSIGLG MSAIVVLIFA QWTTNSTNLV
SASLGLSVVI RALSRPVLVV LMAIAGLLLA YNGMINNFTQ FLSLLGVLIS PIAGVYLVEY
YFIKSSRLQK NVSEASFLNV AAAISWSLGS LVSLLTSPDF FDLFTISSIS ALDGVIVSMV
IYIGMHKIFP QLAD
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