Gene PC1_1720 details

Gene Information

• Locus tag: PC1_1720
• Symbol: lolA
• ID: 8132662
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium carotovorum subsp. carotovorum PC1
• Kingdom: Bacteria
• Replicon accession: NC_012917
• Strand: +
• Start bp: 1985278
• End bp: 1985889
• Gene Length: 612 bp
• Protein Length: 203 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 644865008
• Product: outer-membrane lipoprotein carrier protein
• Protein accession: YP_003017297
• Protein GI: 253688107
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG2834] Outer membrane lipoprotein-sorting protein
• TIGRFAM ID: [TIGR00547] periplasmic chaperone LolA

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAGT GGTTAGCCAT CAGTTGCCTG ATTGCAGGTA TGACCTCAAC TGCTGTCTAT 
GCGGACGCGG CAAAAGATTT GCAGGGTCGC CTCAATAAAG TAAACAGTTT CCATGCAAAC 
TTCAGCCAGA AAGTCACCAG TGCTGATGGC GCAGCGGTGC AGGAAGGGGA AGGCGAACTG 
TGGCTGAAGC GTCCTAACCT ATTTAACTGG AAAACCACAT CGCCTGATGA GAGTACATTG 
ATTTCTGACG GTAAAACACT TTGGTTTTAC AACCCGTTTG TCGAACAAGT CACGGCAACC 
TGGTTGAAGG ATGCCACAGG GAATACGCCG TTCATTCTGA TAACGCGTAA CGATGCCAGC 
GACTGGAATA AGTACGATGT GCGCCAGAAA GGCGATGATT TTGAGCTTAC GCCGAAATCT 
GCGAGCGGTA ATCTGAAACA GTTCGCGATT AATGTGACGA CCAACGGCAC GATCAAGCAG 
TTTACCGCGA CGGAACAAGA TGGGCAGCGG AGCACCTATG TGCTGAAGAA CCAGCAAAAT 
GCCGCTGTTG ATGCCGCGCA ATTCACGTTC ACACCGCCGA AAGGCGTCAC GCTGGATGAC 
CAGCGTCAGT GA 

 

Protein sequence

MKKWLAISCL IAGMTSTAVY ADAAKDLQGR LNKVNSFHAN FSQKVTSADG AAVQEGEGEL 
WLKRPNLFNW KTTSPDESTL ISDGKTLWFY NPFVEQVTAT WLKDATGNTP FILITRNDAS 
DWNKYDVRQK GDDFELTPKS ASGNLKQFAI NVTTNGTIKQ FTATEQDGQR STYVLKNQQN 
AAVDAAQFTF TPPKGVTLDD QRQ