| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1710 |
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| Symbol | |
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| ID | 8132652 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1971178 |
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| End bp | 1971399 |
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| Gene Length | 222 bp |
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| Protein Length | 73 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644864998 |
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| Product | cold-shock DNA-binding domain protein |
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| Protein accession | YP_003017287 |
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| Protein GI | 253688097 |
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| COG category | [K] Transcription |
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| COG ID | [COG1278] Cold shock proteins |
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| TIGRFAM ID | [TIGR02381] cold shock domain protein CspD |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.138064 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAGACAG GTACTGTTAA ATGGTTCAAT AATGCCAAAG GGTTTGGTTT TATCTGTCCA
GAAGGGGGTG GTGACGATAT TTTCGCGCAC TACTCAACCA TTCAAATGGA TGGCTACCGG
ACTCTGAAAG CCGGACAGGT TGTCAGGTTT GATGTTCATC AAGGGCCGAA AGGTAATCAC
GCTTGCCTGA TCGTCCCGCA AGTCGCCGAG ACCGCATCCT GA
|
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| Protein sequence | METGTVKWFN NAKGFGFICP EGGGDDIFAH YSTIQMDGYR TLKAGQVVRF DVHQGPKGNH
ACLIVPQVAE TAS
|
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