| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1704 |
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| Symbol | |
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| ID | 8132646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 1962733 |
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| End bp | 1963560 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644864992 |
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| Product | N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD |
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| Protein accession | YP_003017281 |
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| Protein GI | 253688091 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG3023] Negative regulator of beta-lactamase expression |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.257773 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGAAAT GGATGGTCTG CATAGCGCTG GGGCTGTTGA CGGGGTGTCA ATCGACTTCC
TCGTTGCAGG AACAGAATAA TTATGTGCTG GAGACGGGAT TGCAGTCGCG GGCGCAGGAG
TCCCGTATTC GCTTTCTGGT GATCCACTAC ACCGCGGAAG ATTTTGCCAC CTCGCTGAAT
ATTCTGACGG ATGAGCATGT CAGCGCGCAT TATCTTGTTC CGGCGCATCC GCCTTTGCAG
CGCGGCAAGC CGCTTGCCTG GCAACTGGTA CCGGAATCTC AGGCTGCCTG GCATGCGGGT
GCCAGTAGCT GGCGCGGGTT TAGTCGGCTG AATAATTCCT CGATTGGTAT TGAGATTGAA
AACGCAGGCT ATCAGCGCAC GCTAACGGGC TATACGTGGG AGCCGTTCAC TGCCGCTCAG
ATTCAACTGG TAACTGCGCT TGCCCGTGAC ATTGTCGCTC GCTACCAGAT TGCGCCGCAG
AATGTGGTCG CGCACAGCGA TATTGCCCCA CAGCGGAAAC AAGATCCAGG GCCGCTGTTC
CCCTGGCAGG CGCTGGCGCA AGCGGGCGTG GGTGCCTGGC CGGACGCGCA GCGGGTGGCG
TTTTATTTGC AAGGACGACC AACGACGCAG TCGGTGGATG AAGCAGTTCT GCTGGAAAAG
CTAGGGCGCT ATGGCTATTC GGTGCAGGAT ACGATGACGG CGCGTGAGAA GCGGCAGGTG
ATTGCCGCTT TCCAGATGCA TTTCCGACCT GCTAACTATC AAGGTCAGCC AGATGCGCAG
AGTGAAGCGA TTGTCGATGC ACTGCTGGAG AAATACGGCA GCCGCTAA
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| Protein sequence | MLKWMVCIAL GLLTGCQSTS SLQEQNNYVL ETGLQSRAQE SRIRFLVIHY TAEDFATSLN
ILTDEHVSAH YLVPAHPPLQ RGKPLAWQLV PESQAAWHAG ASSWRGFSRL NNSSIGIEIE
NAGYQRTLTG YTWEPFTAAQ IQLVTALARD IVARYQIAPQ NVVAHSDIAP QRKQDPGPLF
PWQALAQAGV GAWPDAQRVA FYLQGRPTTQ SVDEAVLLEK LGRYGYSVQD TMTAREKRQV
IAAFQMHFRP ANYQGQPDAQ SEAIVDALLE KYGSR
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