Gene PC1_1689 details

Gene Information

• Locus tag: PC1_1689
• ID: 8132631
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium carotovorum subsp. carotovorum PC1
• Kingdom: Bacteria
• Replicon accession: NC_012917
• Strand: +
• Start bp: 1949087
• End bp: 1949806
• Gene Length: 720 bp
• Protein Length: 239 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 644864977
• Product: nitroreductase A
• Protein accession: YP_003017266
• Protein GI: 253688076
• COG category: [C] Energy production and conversion
• COG ID: [COG0778] Nitroreductase

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.589123
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACACCGA CTATTGATTT GCTACAGCGC CACCGTTCTA TTCGTGCGTT TACGTCTCAG 
CCAGTAACGG ATGAGCAACG CCACGCCATT ATTACCTCCG CACAAAGCGC GTCCAGTTCC 
AGTTTTTTAC AATGCAGCTC CATTATTCGT ATTACCGATC CTGCCGTGCG CGAAACGCTG 
GTTCACTATA CCGGCGAACA AGGCTATGTA GCGCAGGCGG CAGAATTTTG GGTCTTTTGT 
GCCGATTTCC ACCGCCATGT AGCGATCTTC CCACAGGCAG AAACCGGGCT GGCCGAGCAG 
TTGCTGATTG GCTGTGTCGA TACCGCGCTC ATGGCGCAGA ATGCGCTGGT CGCCGCAGAG 
TCGCTGGGAT TAGGTGGGGT ATTTATCGGT GGAATCCGCA ACCGAATTGC CGATGTCACG 
CAGTTGCTGC AATTGCCAAC GCTGGTTATA CCATTGTTTG GCCTGTGCCT GGGACACCCG 
GATGCGGAAC CGATGCTGAA ACCTCGCATG CCAACCGCTA TGCTGCTGCA TGAGAATGTC 
TATCAACCGC TCGACCGCGA TGTGCTAGCG CAATACGATC GGCAAATGTT GGAATATTAT 
CTGCAACGTA CCGGTAGTCG CCGCGAAAGC TGGAGTGAGC ACGTCGAACG GACGCTGAAA 
AAAGAGTTGC GTCCATTCAT GCTGGACTAC TTACATCAAC AAGGATGGGC GATACGTTAG 

 

Protein sequence

MTPTIDLLQR HRSIRAFTSQ PVTDEQRHAI ITSAQSASSS SFLQCSSIIR ITDPAVRETL 
VHYTGEQGYV AQAAEFWVFC ADFHRHVAIF PQAETGLAEQ LLIGCVDTAL MAQNALVAAE 
SLGLGGVFIG GIRNRIADVT QLLQLPTLVI PLFGLCLGHP DAEPMLKPRM PTAMLLHENV 
YQPLDRDVLA QYDRQMLEYY LQRTGSRRES WSEHVERTLK KELRPFMLDY LHQQGWAIR