| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1686 |
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| Symbol | |
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| ID | 8132628 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1946007 |
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| End bp | 1947695 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644864974 |
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| Product | hypothetical protein |
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| Protein accession | YP_003017263 |
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| Protein GI | 253688073 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2985] Predicted permease |
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| TIGRFAM ID | [TIGR01625] AspT/YidE/YbjL antiporter duplication domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0560693 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATATAA ACGTCGCTAA TTTGTTAAAT GGGAATTACA TTCTGCTTTT ATTCGTGGTT
CTTTCATTAG GACTCTGCCT GGGGAAATTA CGCCTCGGGC CAGTACAACT CGGTAATTCT
ATTGGCGTTT TAGTGGTTTC TTTATTACTC GGCCAACAAC ATTTTTCGAT TAATACCGAA
GCACTGAGCC TCGGTTTCAT GTTATTTATT TTTTGCGTGG GAGTGGAAGC CGGACCCAAT
TTCTTTTCTA TTTTCTTCCG CGACGGAAAA AATTATTTCA TGCTTGCGCT GGTGATGGTC
GGTAGCGCAA TGTTACTCGC GCTGGGTTTA GGTAAATTCT TTGGCTGGGG AATTGGCCTG
ACGGCCGGGA TGCTGGCGGG TTCCATGACA TCCACGCCGG TGCTGGTCGG CGCAGGCGAC
ACGCTGCGCA ACACCGCCAG TATGGGCAGC CAGCTCGGTA TTGAGCAAGA CCACCTGAGC
CTGGGCTATG CGCTGACCTA TCTGGTCGGG CTGGTCAGCC TCATTTTTGG CGCACGCTAT
CTACCCAAAC TTCAGCATCA GGATCTCCCC ACCAGCGCGC AGCAGATTGC ACGCGAGCGC
GGGCTAGACG CAGACAGCCA GAGAAAAGTC TATCTGCCAG TGATTCGCGC CTATCGCGTC
GGACCGGAGC TGGTTGACTG GGCGGCGGGC AAGAATTTGC GCGAGTTGGG AATCTATCGT
CAGACCGGCT GCTACATCGA ACGCATCCGA CGCAACGGCA TTCTGGCCAG TCCTGACGGT
GATGCCGTTT TACAAATCGG TGATGAAATC GCGCTGGTTG GCTATCCGGA TTCGCACTCC
CGCCTGAACT CCAATTTCCG CGACGGTAAG GAAGTTTTCG ATCGCGATTT ACTGGACATG
CGTATTGTCA CCGAAGAGAT CGTCGTCAAG AATCACAATG CCGTCGGCAA GCGCCTTAGC
CAATTGAAGC TGACCGATCA CGGCTGTTTT CTAAACCGTA TTGTCCGCAG CCAGATCGAA
ATGCCGATTG ACGATAGCGT CGTGCTGAAT AAAGGAGATG TCTTGCAGGT CAGCGGCGAC
GCCCGCCGGG TAAAAAGCAT TGCTGACAGA ATCGGGTTCA TTTCTATTCA CAGCCAGGTC
ACCGACCTAC TGGCTTTCTG CGCTTTTTTC GTTATCGGTA TCATGGTCGG ACTGATCACC
ATCCAATTTA GCAACTTCAC CTTTGGTATC GGTAACGCAG CCGGGTTGCT GTTCGCCGGT
ATCATGCTGG GGTTCCTGCG CGCCAACCAC CCGACCTTCG GCTATATTCC GCAAGGCGCA
CTCAACATGG TCAAAGAATT TGGCCTGATG GTCTTTATGG CTGGCGTTGG GCTGAGTGCA
GGCAGCACCA TCAACAGTAG CCTGGGTGAA GTCGGTATCC AGATGCTGGC CTCGGGGCTT
ATTGTCAGTC TGGTGCCGGT GGTGATTTGT TTCCTGTTTG GCGCCTATGT ACTGAAAATG
AACCGAGCGC TGCTGTTTGG CGCGATGATG GGCGCACGAA CCTGTGCTCC TGCGATGGAC
ATTATCAGCG ATACGGCTCG CAGTAACATC CCTGCCCTCG GCTATGCGGG TACCTATGCG
ATCGCCAACG TGCTGCTGAC ATTAGCGGGT TCACTTATCG TGATTATCTG GCCTGAATTA
CCCGGCTGA
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| Protein sequence | MNINVANLLN GNYILLLFVV LSLGLCLGKL RLGPVQLGNS IGVLVVSLLL GQQHFSINTE
ALSLGFMLFI FCVGVEAGPN FFSIFFRDGK NYFMLALVMV GSAMLLALGL GKFFGWGIGL
TAGMLAGSMT STPVLVGAGD TLRNTASMGS QLGIEQDHLS LGYALTYLVG LVSLIFGARY
LPKLQHQDLP TSAQQIARER GLDADSQRKV YLPVIRAYRV GPELVDWAAG KNLRELGIYR
QTGCYIERIR RNGILASPDG DAVLQIGDEI ALVGYPDSHS RLNSNFRDGK EVFDRDLLDM
RIVTEEIVVK NHNAVGKRLS QLKLTDHGCF LNRIVRSQIE MPIDDSVVLN KGDVLQVSGD
ARRVKSIADR IGFISIHSQV TDLLAFCAFF VIGIMVGLIT IQFSNFTFGI GNAAGLLFAG
IMLGFLRANH PTFGYIPQGA LNMVKEFGLM VFMAGVGLSA GSTINSSLGE VGIQMLASGL
IVSLVPVVIC FLFGAYVLKM NRALLFGAMM GARTCAPAMD IISDTARSNI PALGYAGTYA
IANVLLTLAG SLIVIIWPEL PG
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