| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1685 |
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| Symbol | |
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| ID | 8132627 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1945000 |
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| End bp | 1945668 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644864973 |
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| Product | deoxyribose-phosphate aldolase |
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| Protein accession | YP_003017262 |
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| Protein GI | 253688072 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0274] Deoxyribose-phosphate aldolase |
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| TIGRFAM ID | [TIGR00126] deoxyribose-phosphate aldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0166673 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACTGACT ACGCACGCTA TATCGACCAC ACACTGCTGG CCGCCAATGC CACCGAACAG
CAAATCATCG CGCTGTGTGA TGAAGCGGTA GCACACCGTT TTTATGCCGT TTGTGTGAAT
TCAGGTTACG TTCCCTTAGT CGCCGAAAAG CTGAAAGGCA CGGACGTGCA GGTATGCTCT
GTTATCGGTT TTCCTCTCGG AGCAGGCCTG ACTGCCAGTA AGGCTTTTGA AGCCAAAGCG
GCGATTGATG CCGGTGCTCA GGAGATCGAC ATGGTGATTA ATGTCGGCTG GTTGAAAAGC
GGGAAAATTG CCGCCGTTCA GGCGGATATT CAGGCCGTGC GTGAGGTTTG CGCCGCTATA
CCGTTGAAGG TAATATTGGA AACCTGTCTG CTTGACGACG AACAGATTGT CCTTGTGTGT
GAAATGTGTC GTCAGTTGGA TGTCGCGTTC GTCAAAACGT CTACTGGTTT CAGCACCGGC
GGCGCACGCG AAGAACACGT TCGACTGATG CGTAACACCG TCGGCAGCGA AATGGGTGTC
AAAGCATCCG GCGCGGTTCG CGATCGCCAA ACGGCACAAC GCATGATTGA AGCAGGCGCC
ACGCGTATCG GCACCAGCTC AGGCGTTGCT ATCGTTTCAG GTGAAGCTGC CGCAGCAGGA
AACTACTAA
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| Protein sequence | MTDYARYIDH TLLAANATEQ QIIALCDEAV AHRFYAVCVN SGYVPLVAEK LKGTDVQVCS
VIGFPLGAGL TASKAFEAKA AIDAGAQEID MVINVGWLKS GKIAAVQADI QAVREVCAAI
PLKVILETCL LDDEQIVLVC EMCRQLDVAF VKTSTGFSTG GAREEHVRLM RNTVGSEMGV
KASGAVRDRQ TAQRMIEAGA TRIGTSSGVA IVSGEAAAAG NY
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