| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1684 |
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| Symbol | |
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| ID | 8132626 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1944195 |
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| End bp | 1944968 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644864972 |
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| Product | DNA-binding transcriptional repressor DeoR |
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| Protein accession | YP_003017261 |
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| Protein GI | 253688071 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0187578 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAAACGC GGCGCGACGA ACGAATCGGC AGACTGGCTC AGGCATTAAA GAAAACCGAT
AAACTCCATC TTAAGGACGC CGCACAGCTA CTCGGCGTGT CCGAGATGAC CGTGCGCCGC
GATCTCAATG CCGATTCCAC CAGCGTTATG CTGCTCGGCG GCTACGTCGT GAGCGACCTG
AAAAATAACG GTGTCACGAA CTATTTTGTC TCCGACCAGC AGAACAAGCA CGTAAGAGAA
AAGCAGGCTA TCGGTGCGGT GGCTGCGCCT CTCGTAGAGG CAAACGATAC CGTTTTTTTC
GACTGCGGCA CCACCATCCC CTTCATCATT GATGCCATTC CTGATGAGCT GCCTTTTACT
GCGATTTGTT ATTCGCTCAA TACCTTCCTG GCGCTACAGG ACAAAAAGGC GTGCAGAGTG
ATTTTGTGCG GCGGGGAATA TCATCCCGAT AACGCAATTT TCACTCCGCT CAACCAGCGC
AGCGAACTGG ACAACGTGTG CCCGAATAAA GCGTTTATCT CTGCGGCGGG TATCGAACTT
AACGCAGGTG CTACCTGCTT TAACTTTGCC GAATTGGGCA TGAAACAACG CGCAATGGCG
ACCGCCCAAC GAATTATTAT TGTGGCGGAC AGCAGCAAGT TCGGCCAGAT CAAACGTGCC
TGTATCGGCC CAATGACGCT GTTTGACACG GTCATTTCCG ACAGCGCACC GGGCGAAACC
TACTTACGTT ACTTTTCCAA CAACGGCATC CAGTTAATCC ACCCAAGAGA TTAA
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| Protein sequence | METRRDERIG RLAQALKKTD KLHLKDAAQL LGVSEMTVRR DLNADSTSVM LLGGYVVSDL
KNNGVTNYFV SDQQNKHVRE KQAIGAVAAP LVEANDTVFF DCGTTIPFII DAIPDELPFT
AICYSLNTFL ALQDKKACRV ILCGGEYHPD NAIFTPLNQR SELDNVCPNK AFISAAGIEL
NAGATCFNFA ELGMKQRAMA TAQRIIIVAD SSKFGQIKRA CIGPMTLFDT VISDSAPGET
YLRYFSNNGI QLIHPRD
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