| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1680 |
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| Symbol | |
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| ID | 8132622 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 1940112 |
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| End bp | 1940957 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644864968 |
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| Product | NLPA lipoprotein |
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| Protein accession | YP_003017257 |
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| Protein GI | 253688067 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1464] ABC-type metal ion transport system, periplasmic component/surface antigen |
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| TIGRFAM ID | [TIGR00363] lipoprotein, YaeC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000082147 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTGA CGCATTCTGT TCGCGCCGCT CTGGGCATCA CACTGCTTGC TGCTGGTATG
CAACTGGCGA TGGCCAGCAG CGATCCACAG ACGATCACAT TTGGCGTGGC GCCAGGGCCG
TATGGCGACA TGGTGAATCT GGCGATCAAA CCTGAGCTGG TGAAGAAAGG CTACAAGGTC
GTCGTGCGTG AATTCAGCGA TTACGTTCAG CCCAATCTGG CGTTGGCTAA TGGCAGCATC
GATGCCAACC TTTTCCAGCA TACGCTGTAT CTGGAAAAAT TCGCCGCTGA TAAAGGGCTA
AAAATTTCCC CGTTGATTAC CGTGCCGACG GCCAGCATGG GCTTCTACTC GAAGAAAATC
AAATCGCTGG ATGAACTGAA GAAAGGGGAT GTCGTCACGC TCTCTAACGA CGCTACCAAT
CTGGCGCGCG GCCTGCGTTT CTTACAATCG ATGGGGCTGA TTACGATTAA GGCGGATATC
GATCCGACCA AAGCTTCGGA AAAGGATATT CTTGAAAACC CGCGCGGGTT GGTCTTCAAA
CCGATGGAGG CGGCGCAACT GCCTCGCACG CTGGATAGCG TGACGGCCTC GCTGGTGAAC
GGTAACTTCG CGCTGGCGTC CGGTCTGAAA CTGTCATCGG CTATCAAGCT GGAAACGCTG
GATGAGAACC TGAAGAACAT TATTGCCGTA CGCACCGACG ATCTCGATAA GCCCTTTGTT
AAAGATACCA AAGCGATTGT GGAAGGACCC GCGTATGCCG CAGTGATCAA CGATCCGGCA
TTGATGTATA GCCAGTTCCA AAAGCCGGAG TGGATGCAGG CGAAAACGCC AGCACCCGCA
CAGTAA
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| Protein sequence | MKLTHSVRAA LGITLLAAGM QLAMASSDPQ TITFGVAPGP YGDMVNLAIK PELVKKGYKV
VVREFSDYVQ PNLALANGSI DANLFQHTLY LEKFAADKGL KISPLITVPT ASMGFYSKKI
KSLDELKKGD VVTLSNDATN LARGLRFLQS MGLITIKADI DPTKASEKDI LENPRGLVFK
PMEAAQLPRT LDSVTASLVN GNFALASGLK LSSAIKLETL DENLKNIIAV RTDDLDKPFV
KDTKAIVEGP AYAAVINDPA LMYSQFQKPE WMQAKTPAPA Q
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