Gene PC1_1679 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1679 
Symbol 
ID8132621 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp1939351 
End bp1939968 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content53% 
IMG OID644864967 
ProductGlutathione S-transferase domain protein 
Protein accessionYP_003017256 
Protein GI253688066 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones1 
Plasmid unclonability p-value0.000555439 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAACGA TTTGGGGTCG TGATAACTCG ACCAACGTAA AGAAGGTCCT GTGGTGTGCA 
GAAGAACTGG CGCTGTCTTA TCAGCATATT GCGGCGGGTG GACAATTCGG TCTTAACCAT 
GAAGCCGATT ATCTGGCGAT GAACCCAAAT GGCCTCATCC CCTGTTTGCG AGACGGCGAT 
CTGGTGCTGT GGGAATCCAA CACCATCGTA CGTTATCTGG CGGCGCAGTA TGGGCAAGAT 
TCGCTGTATC TCGCGGATGC AGGCAAACGC GCTAGTGCTG AAAAGTGGAT GGACTGGGCA 
AGCGCCCTCG CCGTCTCCTT CGGACCGGTG TTCATTAATA TGGTGCGCGT CGCGCCGGAA 
AAACGCGATA TGGCCTTAGT ACAGAAAGGC ATCGCCGAAT GCGAACGCCT GTTCGATATT 
GTCGATACCG TTCTGGCTAA TCAGCCGTGG CTATCCGGCG AACAGTTTGG TGTTGGCGAT 
ATTCCACTCG GTTGTATTGT TTACGGCTGG CTGAATATGC CGATTAAGCA GCAGTCGCAT 
CCGCATCTGG AACGCTGGTA TCAGCAACTC ACCGAACGTC CGGCTTATCA GAAGCACGTC 
ATGATTCCGC TGTCTTAA
 
Protein sequence
MITIWGRDNS TNVKKVLWCA EELALSYQHI AAGGQFGLNH EADYLAMNPN GLIPCLRDGD 
LVLWESNTIV RYLAAQYGQD SLYLADAGKR ASAEKWMDWA SALAVSFGPV FINMVRVAPE 
KRDMALVQKG IAECERLFDI VDTVLANQPW LSGEQFGVGD IPLGCIVYGW LNMPIKQQSH 
PHLERWYQQL TERPAYQKHV MIPLS